DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15097 and Klhl28

DIOPT Version :9

Sequence 1:NP_001261079.1 Gene:CG15097 / 37172 FlyBaseID:FBgn0034396 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_079983.1 Gene:Klhl28 / 66689 MGIID:1913939 Length:571 Species:Mus musculus


Alignment Length:572 Identity:208/572 - (36%)
Similarity:325/572 - (56%) Gaps:21/572 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HQNPGHCIASFA---------AINQMRNNAQLCDVRLEVGGDTINAHRVVLASVSPYFYAMFNDD 104
            |..|.:.:|:..         .:|.:|.:.:|||:.|.||...|:||:|||||:||||.|||..:
Mouse     3 HTAPTYMLANLTHLHSEQLLQGLNLLRQHHELCDIILRVGDVKIHAHKVVLASISPYFKAMFTGN 67

  Fly   105 MLERTQGLVRLHDVDSSALRQLIDYTYTGEITITEQNVQVLLPASGLLQMHSVRDACCKFLLRQL 169
            :.|:....|....:|.:||:.:::|.|||.:.|::..|:.||||:.|||:..|...||.||..||
Mouse    68 LSEKENSEVEFQCIDEAALQAIVEYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCAFLESQL 132

  Fly   170 HPSNCLGIRSFADAHSCKELHTRSHKYALQNFQQVVGTEEFLLLPFEEVRELISNSQLNISSEER 234
            .|.||:||..||:.:.|.:|:..:.|:..|||:.|..||||..|...::.|::||..||:::||.
Mouse   133 DPGNCIGISRFAETYGCHDLYLAATKFICQNFESVCQTEEFFELTHADLDEIVSNDCLNVATEET 197

  Fly   235 VFAAVINWVKHDLPTRRLHIAELMSNVRLPLVSRDFLMSCVETETLMRDDSECKELLLEAMKYHL 299
            ||.|:.:|:|:|:..|:.::|:|:::|||||:|..||....|...|:|||..||.||.||:|||.
Mouse   198 VFYALESWIKYDVQERQKYLAQLLNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHF 262

  Fly   300 LPEQRSIMGSQRTQERRPEGMKPYVFAVGGGS-LFAIHNECEVYNPRSNSWSPVAPMLWRRSRSG 363
            :||.|  :..|.....||......:.||||.| |||..:..|:|.|:::||..:||:...|...|
Mouse   263 MPEHR--LSHQTVLMTRPRCAPKVLCAVGGKSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEFG 325

  Fly   364 VTSLHKQLYVVGGYD-----GVS---DLATAESYNPLTNKWSNITPMGTKRSCLGICSYDALIYV 420
            :..|.::::|:||.:     |::   ...:.|.:||.||.|:::..|...||.||:......::.
Mouse   326 ICVLDQKVFVIGGIETSVRPGMTVRKHENSVECWNPDTNTWTSLERMNESRSTLGVAVLAGEVFA 390

  Fly   421 CGGYDGASCLSSMERYDPLTGIWSSCPAMSTRRRYCRLAVLENCIYSLGGFDSTNYQSSVERFDP 485
            .|||||.|.|.|:|:|.|....|.....|:|.|.....|||:..:|::||:... :.:||||:||
Mouse   391 LGGYDGQSYLQSVEKYIPKIRQWQPVAPMTTTRSCFAAAVLDGMLYAIGGYGPA-HMNSVERYDP 454

  Fly   486 RVGRWQPVPSMSARRSSCGVASTDGHLYCIGGNDGTMCMSSGERFSLRRNSWEPIAAMHSRRSTH 550
            ....|:.|..|:.:|...||....|.::.:||::|...:||.||:...:|.|.....|...|:..
Mouse   455 SKDSWEMVAPMADKRIHFGVGVMLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGV 519

  Fly   551 EVVEVEGALFALGGNDGSSSLNSVERYDTRLNKWSVVNAMVARRSSVGAAVL 602
            ....::..|:.:||:.|||.||:|::||...:.|.....|:..|.:.|...|
Mouse   520 GAAVIDNYLYVVGGHSGSSYLNTVQKYDPISDTWLDSAGMIYCRCNFGLTAL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15097NP_001261079.1 BTB 63..166 CDD:279045 45/102 (44%)
PHA03098 65..539 CDD:222983 186/482 (39%)
BACK 174..276 CDD:285009 41/101 (41%)
Kelch 324..369 CDD:128874 18/45 (40%)
KELCH repeat 359..402 CDD:276965 13/50 (26%)
Kelch 370..415 CDD:128874 15/52 (29%)
KELCH repeat 406..450 CDD:276965 16/43 (37%)
Kelch 417..463 CDD:128874 18/45 (40%)
KELCH repeat 453..496 CDD:276965 15/42 (36%)
Kelch 464..510 CDD:128874 15/45 (33%)
Kelch_1 499..543 CDD:279660 13/43 (30%)
KELCH repeat 500..545 CDD:276965 14/44 (32%)
KELCH repeat 547..590 CDD:276965 13/42 (31%)
Kelch 559..603 CDD:128874 16/44 (36%)
Klhl28NP_079983.1 PHA03098 35..553 CDD:222983 197/520 (38%)
Kelch 1 284..331 18/46 (39%)
KELCH repeat 321..372 CDD:276965 13/50 (26%)
Kelch 2 332..386 15/53 (28%)
KELCH repeat 376..419 CDD:276965 16/42 (38%)
Kelch 3 387..433 18/45 (40%)
KELCH repeat 423..465 CDD:276965 15/42 (36%)
Kelch 4 435..479 15/44 (34%)
KELCH repeat 469..513 CDD:276965 13/43 (30%)
Kelch 5 480..526 11/45 (24%)
KELCH repeat 516..559 CDD:276965 13/42 (31%)
Kelch 6 528..570 15/41 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.