DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15096 and Slc17a4

DIOPT Version :9

Sequence 1:NP_611376.1 Gene:CG15096 / 37170 FlyBaseID:FBgn0034394 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001258143.1 Gene:Slc17a4 / 679784 RGDID:1584758 Length:495 Species:Rattus norvegicus


Alignment Length:506 Identity:155/506 - (30%)
Similarity:251/506 - (49%) Gaps:64/506 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DMEAK--------NSNKEDEAVGKHSGLGVRHFQVLLLFFALTVAYGCRVNLSVAVVAM--TDAA 68
            |::|:        |.|...|...|.....:||....:|.......|..::|||:|:.||  |.||
  Rat     6 DLKAREGGIPNDSNLNMTQEQSFKKGCCSLRHGLAFILHLCNFSVYTQQMNLSIAITAMVNTTAA 70

  Fly    69 SV------------NPDF----------PEYNWSEKTKSLLLSSFFWGYVITQVPAGQLARKYGG 111
            |.            :.||          |.|:|:.:.:.:||||..:|..:..:|.|.:|..:|.
  Rat    71 SSHANASIERPTTDSQDFWNETLQESKAPVYDWTPEIQGILLSSLNYGSFLAPIPTGYVAGVFGA 135

  Fly   112 KVMILSGLAICSILNILTPICAKIGGWQLVCALRVVEGLCQGVVFPSTHTILSQWAPPKERATLG 176
            |.::..||.:.|:|.:..|:.|: .|..|:..|||::|:.|.:|....:::.::||||.||:.|.
  Rat   136 KYVVGLGLLVSSVLTLFIPLAAE-AGVALLIVLRVIQGMSQVMVLTGQYSMWAKWAPPLERSQLI 199

  Fly   177 TCAYSGNQFGTILMLATSGVIAASPIGWPSIFYISGGIGCVWSVVYFFFGAGSPQECKSISAEEK 241
            |.|.||:..||.|:|...|::..: :|||.||||.|||||...:::|......||....||..||
  Rat   200 TIAASGSMLGTFLVLIAGGLLCQA-LGWPYIFYIFGGIGCACCLLWFPLVYDDPQNHPFISTGEK 263

  Fly   242 KLIEMSQADE-VSGGQEQP----KEQLPTPWLSFFTSPAFLVLIVSHSVHNWGFWTLLTEIPSYM 301
            :.|..|.|.| .|.|...|    .:.||. |          .::||:....|..:|::...|:|:
  Rat   264 RYIMCSLAQEDCSLGWSLPIKAMVKSLPL-W----------AIVVSYFCEYWLLFTIMAYTPTYI 317

  Fly   302 KNILGKDIKSNALLSSLPYVCMF-AMSFVFSSISAQ-LNNRNCISRSTSRKLFNSIGLWIPMVTL 364
            .::|..:::.:.:||:||:  || .:..:...:.|. |.:||.:...|.||||.::|:.:....|
  Rat   318 SSVLQANLRDSGILSALPF--MFGCVCIILGGLLADFLLSRNILRLVTIRKLFTALGVLVSSGIL 380

  Fly   365 VGLGYVNPDQSELAVVLLCFTVGM----NGATYLGFNTNHIDLSPNFAGILMGITNGVANIMSII 425
            |.|.:|:...|.....|:..:|..    :||.     .|.:|::|.:||.|.|:....:.:...|
  Rat   381 VPLPWVSSSLSTTMAFLVLSSVFASLCDSGAL-----INFLDIAPRYAGFLKGLLQVFSYLAGGI 440

  Fly   426 APLIVGFIVTNEHDPEQWRIVFFIAAGFYLVGNTLYVIFGKANVQPWNDPP 476
            ||.:.||.::.:.: ..||.||.:||...:||...|:|||:|.||.|...|
  Rat   441 APTVAGFFISQDSE-FGWRNVFLLAAAIDVVGLLFYLIFGRAEVQDWAKEP 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15096NP_611376.1 2A0114euk 36..480 CDD:129972 149/476 (31%)
MFS 40..464 CDD:119392 139/458 (30%)
Slc17a4NP_001258143.1 MFS_SLC17 40..479 CDD:340876 140/459 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342518
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.