DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mctp and TCB3

DIOPT Version :9

Sequence 1:NP_001261078.1 Gene:Mctp / 37165 FlyBaseID:FBgn0034389 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_013639.1 Gene:TCB3 / 854903 SGDID:S000004537 Length:1545 Species:Saccharomyces cerevisiae


Alignment Length:473 Identity:105/473 - (22%)
Similarity:185/473 - (39%) Gaps:112/473 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 LVAMDKNGLS--DPYVKFKVGGRLLHKSRTIHRDL-NPVWDEVFIVPIEDPFQPIIVKVFDYDWG 309
            ::..|.:|:.  |||....:..|:|:|| ..|.|. :|::|....|||..|.|.:.::..||...
Yeast   808 IIKGDLSGVGDVDPYYTVSLNRRVLYKS-IYHSDTDHPIFDNSTYVPIFSPNQILTLEFHDYQKI 871

  Fly   310 LQDDFMGSAKLDLTQL------------ELGKAEDIHLQLCDSSGNGGSGL-------------- 348
            .:|.|:||.::..:.:            ..||.|...|:|.|........:              
Yeast   872 GKDRFIGSVQIPTSNVFKKDPKSGKYVGNNGKEEISKLKLKDHEHKVTESIVNVSTTFIPINLVY 936

  Fly   349 -GEILINLTLWPRSQEDKEMHFQRNSKLAESSKRLKSQIWSSVVTILLVKAKDLPLAEDGSKLND 412
             .|.|:|:....:..::|:..|:...:..|.......:.|.      :.:.:| |...|..|:|.
Yeast   937 SPEELVNVEKLEKELKEKKKKFEATQEENEQEMEKNPKEWE------VAEIED-PFDSDEKKINR 994

  Fly   413 THFKFRLG-NEKYKSKS------------SWTERWLEQFDLHLFDED---------------QNL 449
               |.:|. ||..|.||            |.:..:||     :..:|               .|.
Yeast   995 ---KAKLSLNELIKQKSGILSMQILEGTLSPSSAYLE-----ILADDISYPVFICMKPSQGKLNS 1051

  Fly   450 EIA-LWNRNTLYGKAIIDLSVFQRENTHGIWKPLEDCPGEVHLMLTISGTTALETISDLKAFKED 513
            |:| ::.|:..|.|.     .|:....| |.|..:|...|          |:..|:..||...|:
Yeast  1052 EMANIFIRDLNYSKL-----HFRVSKKH-IAKDSDDVISE----------TSYSTLKLLKQAYEE 1100

  Fly   514 PR----EAQLLRERYKF------LRCLQNLRDVGHLTVKVFGATGLAAADIGGKSDPFCVLELGN 568
            |.    ....::.|:.:      |...:::.|.|:|.:|:....||.:||..|.||||..:.:.:
Yeast  1101 PMWLNFNGSKMKVRFLYTPTSVKLPSSESVEDTGYLNIKLISGHGLKSADRNGYSDPFVHIFVND 1165

  Fly   569 ARL-QTQTEYKTLTPNWNKIFTFNV--KDITQVLEITVFDEDRDHRVEFLGKLVIPLLRIKSG-V 629
            .:: ::..:.|||.|.||:.....:  :...||: ..|.|.||....:.||:..:.:..::.| .
Yeast  1166 KKVFKSNIKKKTLDPVWNEDAKIPILSRSKNQVI-FNVLDWDRAGDNDDLGQASLDVSSLEVGKT 1229

  Fly   630 KRWYTLKDKNLCVRAKGN 647
            ..|      ||.:..:|:
Yeast  1230 YNW------NLNLNTQGS 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MctpNP_001261078.1 C2A_MCTP_PRT 237..357 CDD:176007 33/138 (24%)
C2B_MCTP_PRT 390..497 CDD:176022 28/135 (21%)
C2C_MCTP_PRT 537..658 CDD:176023 31/115 (27%)
PRT_C <789..893 CDD:285560
TCB3NP_013639.1 COG5038 44..1335 CDD:227371 105/473 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I2507
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2311
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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