DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mctp and AT5G17980

DIOPT Version :9

Sequence 1:NP_001261078.1 Gene:Mctp / 37165 FlyBaseID:FBgn0034389 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_197299.1 Gene:AT5G17980 / 831665 AraportID:AT5G17980 Length:1049 Species:Arabidopsis thaliana


Alignment Length:1034 Identity:216/1034 - (20%)
Similarity:352/1034 - (34%) Gaps:277/1034 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RIQYVDQVDQVELDQQQQPGSSSTVSGSTPPLQISPHGSP-------SLQQSQRLGKHLSKSASE 60
            |:.|.|:                    ..|||:  |..:|       ..::::..|...||...|
plant   131 RVYYADE--------------------KPPPLK--PTVAPLETVVEEKTEETKAEGPDESKPPPE 173

  Fly    61 LNGHDCHLSE------------SPHISPKRAKSAVAQQLAGVSSGGVASGVGVLQKTHGFFNNLR 113
            .|.....:.|            ||...||..:.|........:.||.........|..       
plant   174 TNDIPAEVKETVKPPQPPPEESSPAEGPKPDEEASPPLQENATVGGEEPPASESDKNE------- 231

  Fly   114 HRWSRAKSKDRLGRKSP--SDFLEESTDYAADYSSEGSSVTHSPRHRS-------TTIGGSPLAR 169
               :.||..:...:..|  .|.:.||.|..:..|:..|.:......||       |..|..||.|
plant   232 ---AEAKPVEEPPQNQPDGEDIVLESEDTMSWASAPRSPLPEVIISRSVSGSIPETKNGPQPLRR 293

  Fly   170 EFRATAKMAQVIQRFGGSMEGRIDEHPENGSAGCSPPELSTQQQLEALQANELRRKREAQLRQFV 234
            ....||.....|                   :..|..|.||...:|.:              .:|
plant   294 SVSETASYTSEI-------------------SDVSTIERSTFDLVEKM--------------HYV 325

  Fly   235 FFQL---RVHLKSGSDLVAMDKNGLSDPYVKFKVGGRLLHKSRTIHRDLNPVWDEVFIVPIEDP- 295
            |.::   |....|||            |..|..:.|.:: :|:...:.....||:.|....:.| 
plant   326 FIRVVKARSLPTSGS------------PVTKISLSGTMI-QSKPARKTSCFEWDQTFAFLRDSPD 377

  Fly   296 --FQPII-VKVFDYDWGLQ-DDFMGSAKLDLTQLELGKAEDIHL--QLCDSSGNGGSGLGEILIN 354
              ..||: :.|:|...|:: ..|:|....|::::.|....|..|  |.....| ||:...:::  
plant   378 LSSSPILEISVWDSSTGIETSQFLGGICFDVSEIPLRDPPDSPLAPQWYRLEG-GGAHNSDLM-- 439

  Fly   355 LTLWPRSQEDKEM----------HFQRNSKLAESSKRLKSQIWSSVVTILLVKAKD-LPLAEDGS 408
            |..|..:|.|:..          :....:|:..|||     :|....|:  ::|:| ||......
plant   440 LATWTGTQADESFPDAWKTDTAGNVTARAKVYMSSK-----LWYLRATV--IEAQDLLPPQLTAF 497

  Fly   409 KLNDTHFKFRLGNEKYKSKS--------SWTERWL----EQFDLHLFDEDQ---NLEIALWNRNT 458
            |......|.:||::..|:||        ||.|..|    |.|      .||   .||........
plant   498 KEASFQLKAQLGSQVQKTKSAVTRNGAPSWNEDLLFVAAEPF------SDQLVFTLEYRTSKGPV 556

  Fly   459 LYGKAIIDLSVFQRENTHGI----WKPLEDCPGE-------VHLMLTISG-----TTALETISDL 507
            ..|.|.:.||..:|.....:    |..|||...|       ||:.|...|     ..|....||.
plant   557 TVGMARVPLSAIERRVDDRLVASRWLGLEDPNDEKRGNRSRVHIRLCFDGGYHVMDEAAHVCSDY 621

  Fly   508 KAFKEDPREAQLLRERYKFLRCLQNLRDVGHLTVKVFGATG-LAAADIGGK--SDPFCVLELGNA 569
            :     |...||.:..            ||.:.:.:.|... |....:.||  :|.:.|.:.|:.
plant   622 R-----PTARQLWKPA------------VGIVELGIIGCKNLLPMKTVNGKGSTDAYTVAKYGSK 669

  Fly   570 RLQTQTEYKTLTPNWNKIFTFNVKDITQVLEITVFDEDRDHRVE----------FLGKLVI---- 620
            .::|:|...:|.|.||:.:|:.|.|...||.|.|||....:.|:          .:||:.|    
plant   670 WVRTRTVSDSLDPKWNEQYTWKVYDPCTVLTIGVFDSWGVYEVDGGKEATRQDLRIGKVRIRIST 734

  Fly   621 -----------PLLR-IKSGVKRWYTLKDKNLCVRAKGNSPQIQLELTVVWSEIRAVCRALQPK- 672
                       |||. :..|||:   |.:..|.||....:|.:.. |.|....:..:...::|. 
plant   735 LETGKAYRNTYPLLMLVNGGVKK---LGEIELAVRFVRTAPPLDF-LHVYTQPLLPLMHHIKPLS 795

  Fly   673 --EEKLIQQEA-----------------------------KFKRQLFLRNVNRLKEIIMDILDAA 706
              :|.:::..|                             .|..:....|..|:..::..::|..
plant   796 LFQEDMLRNTAVKILAAHLSRSEPPLRPEIVRYMLDADTHTFSMRKVRANWLRIVNVVAGMVDVV 860

  Fly   707 RYVQSCFEWESPVRSSIAFVFWIVACVYGDLETVPLVLLLIILKNWLVRLITGTTDAAAHYD--- 768
            |:|.....|::|..:.:.....::...:.||....|...|.::..|..|.  .:..|..|:|   
plant   861 RWVDDTRFWKNPTSTLLVHALVVMLIWFPDLIVPTLAFYLFVIGAWNYRF--RSRAALPHFDPRL 923

  Fly   769 --------YEYDEDDDDDKEKEEKKSIKERLQAIQEVSQTVQNTIGYLASLGESTINTFNFSVPE 825
                    .|.||:.|........:.::.|...::.|...||..:|.:|:.||.......:..|.
plant   924 SLADAADRDELDEEFDVVPSNRPPEMVRLRYDKLRNVGARVQTILGEVAAQGEKMQALVTWRDPR 988

  Fly   826 LTWLAVVLLLGAILVLHFVPLRWLLLFWGLMKFSRRLLR---PNTIPNNELLDFLSRVP 881
            .|.:.|.|.....|||:.||.:.:.:..|...|...:.|   |:.:     |:|..|:|
plant   989 ATGIFVGLCFFVALVLYLVPTKMVAMASGFYYFRHPIFRDRKPSPV-----LNFFRRLP 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MctpNP_001261078.1 C2A_MCTP_PRT 237..357 CDD:176007 28/129 (22%)
C2B_MCTP_PRT 390..497 CDD:176022 35/133 (26%)
C2C_MCTP_PRT 537..658 CDD:176023 39/149 (26%)
PRT_C <789..893 CDD:285560 25/96 (26%)
AT5G17980NP_197299.1 C2A_MCTP_PRT_plant 6..136 CDD:175989 2/4 (50%)
C2B_MCTP_PRT_plant 324..446 CDD:176024 31/137 (23%)
C2C_MCTP_PRT_plant 478..623 CDD:175986 39/157 (25%)
C2D_MCTP_PRT_plant 635..764 CDD:176025 33/131 (25%)
PRT_C 893..1049 CDD:285560 36/157 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1886
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D234298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101057
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.870

Return to query results.
Submit another query.