DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mctp and mctp1

DIOPT Version :9

Sequence 1:NP_001261078.1 Gene:Mctp / 37165 FlyBaseID:FBgn0034389 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_031755510.1 Gene:mctp1 / 548485 XenbaseID:XB-GENE-5812768 Length:919 Species:Xenopus tropicalis


Alignment Length:972 Identity:360/972 - (37%)
Similarity:526/972 - (54%) Gaps:156/972 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PHGSPSLQQSQRLGKHLSK---SASELNGH------DCHLSESPHISPKRAKSAVAQQLAGVSSG 93
            |..||......||.|.|.|   |:.:..|.      .||   ||..:.:...:|.|..|..:..|
 Frog     5 PEQSPPSSLQSRLWKSLGKARRSSGKAGGERRSAGTPCH---SPQPARREDLAAPAPMLEEMVPG 66

  Fly    94 GVASGVGVLQKTHGFFNNLRHRWSRAKSK----DRLGRKS-PSDFLEESTDYAADYSSEGSSVTH 153
            .:                   |||..|.:    ||:...| |:....||...:|..||.| |:|.
 Frog    67 MI-------------------RWSGLKGRKQMLDRVFSSSQPNLCCSESVQPSAPCSSPG-SITG 111

  Fly   154 SPRHRSTTIGGSPLAR-------EFRATAKMAQVIQRFG-GSMEGRIDEHPENGSA-------GC 203
            :|.      .||.|.|       :.|.:   .||..:.| |..:..:...|..|..       ..
 Frog   112 TPE------PGSALRRLKDHLLPQNRGS---QQVRDKDGDGQHKSGLSASPTAGKGHRLSHQKSS 167

  Fly   204 SPPELSTQQQLEALQANELRRKREAQLRQ-------------------FVF-----FQLRVHLKS 244
            |.|......||:.|..      :::.|.|                   :.|     :||.|.||:
 Frog   168 SLPGTDCLHQLQPLST------KDSDLAQSKPCGHTKNNNNVGTCTTDYSFPNLGMYQLDVTLKN 226

  Fly   245 GSDLVAMDKNGLSDPYVKFKVGGRLLHKSRTIHRDLNPVWDEVFIVPIEDPFQPIIVKVFDYDWG 309
            ||:|.|.|:.|.||||||||:||:.:.:|:|||::|||||||...:.|:...:|:.|||||||:|
 Frog   227 GSNLAARDRGGTSDPYVKFKIGGKEVFRSKTIHKNLNPVWDEKVCLFIDSIKEPLYVKVFDYDFG 291

  Fly   310 LQDDFMGSAKLDLTQLELGKAEDIHLQLCDSSGNGGSGLGEILINLTL----------------- 357
            |||||||||.||||.:||..::|:.|:|.|.. :....||.|.:.::|                 
 Frog   292 LQDDFMGSAFLDLTTVELNSSKDVALELRDPQ-HSDHKLGTIHLAVSLSIKDNVCIDSPLSILKS 355

  Fly   358 ----------WPRSQEDKEMHFQRNS-KLAESSKRLKSQIWSSVVTILLVKAKDLPLAEDGSKLN 411
                      |.||.:     ||..| ||::..:|  ||:...:|:|.|::.::|. |.|.:.|:
 Frog   356 TEQNTIIKKNWKRSSK-----FQTQSLKLSDLHRR--SQVSRGIVSITLIEGQELK-AMDANGLS 412

  Fly   412 DTHFKFRLGNEKYKSKS---SWTERWLEQFDLHLFDEDQN-LEIALWN-----RNTLYGKAIIDL 467
            |.:.|||||::|||||:   :...:|.||.|:|:|:|... :||.:|:     |:...|:..:||
 Frog   413 DPYVKFRLGHQKYKSKTLPKTLNPQWREQIDMHIFEEQGGVIEITVWDKDAGKRDDFIGRCHVDL 477

  Fly   468 SVFQRENTHGIWKPLEDCPGEVHLMLTISGTTALETISDLKAFKEDPREAQLLRERYKFLRCLQN 532
            |...:|.||.:...||:..|.:.|::|::.:.|: .:||.....||..|.:.:..||..:|.|.|
 Frog   478 STLSKEQTHKLKLKLEEGEGWLVLLVTLTASAAI-AVSDTVGCLEDQNEREAIFRRYSLMRSLTN 541

  Fly   533 LRDVGHLTVKVFGATGLAAADIGGKSDPFCVLELGNARLQTQTEYKTLTPNWNKIFTFNVKDITQ 597
            |.|||.:.||:..|.||.|||:.||||||||:|:.|.||.|||.||.|.|.|||:|:||:|||..
 Frog   542 LDDVGFVQVKIVRAEGLMAADVTGKSDPFCVVEVNNDRLMTQTVYKNLNPEWNKVFSFNIKDIHS 606

  Fly   598 VLEITVFDEDRDHRVEFLGKLVIPLLRIKSGVKRWYTLKDKNLCVRAKGNSPQIQLELTVVWSEI 662
            |||:||:|||||...:||||:.:|||.|::|.::.|.||:|.|....||   .|.||:.|:::.:
 Frog   607 VLEVTVYDEDRDRSADFLGKVAVPLLSIQNGEQKAYVLKNKQLTGPTKG---VIYLEVDVIFNAV 668

  Fly   663 RAVCRALQPKEEKLIQQEAKFKRQLFLRNVNRLKEIIMDILDAARYVQSCFEWESPVRSSIAFVF 727
            :|...:|.|||:|.|:.|.:..:||.|||..|:|...|.:::||.|:.|||:|:||.||..||:.
 Frog   669 KACLGSLVPKEQKYIEDEPRLSKQLLLRNFIRMKRCAMVLVNAAYYINSCFDWDSPQRSLAAFLI 733

  Fly   728 WIVACVYGDLETVPLVLLLIILKNWLVRLITGTTDAAAH-------YDYEYDEDDDDDKEKEEKK 785
            :::.....:|..:||.|||::..|:.  ||....|..||       .:.|.:|||.|||:. |||
 Frog   734 FLLVVWNFELYMIPLALLLLLAWNYF--LIISGKDTRAHDTVVEDMLEDEEEEDDKDDKDC-EKK 795

  Fly   786 SIKERLQAIQEVSQTVQNTIGYLASLGESTINTFNFSVPELTWLAVVLLLGAILVLHFVPLRWLL 850
            ....:|.|||||..:|||.:..:||:.|...||||::||.|||||::.|.....||:|:|||:::
 Frog   796 GFMNKLYAIQEVCVSVQNVLDEVASIAERIKNTFNWTVPFLTWLAIIALCLLTAVLYFIPLRYIV 860

  Fly   851 LFWGLMKFSRRLLRPNTIPNNELLDFLSRVPDNEEINQYRELPPSAPTDQTRNNPKKKLKGS 912
            |.||:.||::::..|..|.|||:||||||||.:.::.|:.||.|.|     |::|.|:.|.:
 Frog   861 LVWGINKFTKKIRNPYMIDNNEILDFLSRVPSDMQVVQFHELKPDA-----RDSPSKRKKNN 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MctpNP_001261078.1 C2A_MCTP_PRT 237..357 CDD:176007 64/119 (54%)
C2B_MCTP_PRT 390..497 CDD:176022 41/115 (36%)
C2C_MCTP_PRT 537..658 CDD:176023 66/120 (55%)
PRT_C <789..893 CDD:285560 50/103 (49%)
mctp1XP_031755510.1 C2A_MCTP_PRT 219..339 CDD:176007 64/120 (53%)
C2B_MCTP_PRT 392..507 CDD:176022 41/115 (36%)
C2C_MCTP_PRT 546..664 CDD:176023 66/120 (55%)
PRT_C <807..>864 CDD:337028 26/56 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I5517
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H75211
Inparanoid 1 1.050 541 1.000 Inparanoid score I1152
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139564at33208
OrthoFinder 1 1.000 - - FOG0002654
OrthoInspector 1 1.000 - - otm47440
Panther 1 1.100 - - LDO PTHR45911
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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