DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mctp and mctp1b

DIOPT Version :9

Sequence 1:NP_001261078.1 Gene:Mctp / 37165 FlyBaseID:FBgn0034389 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_002663716.2 Gene:mctp1b / 100334264 ZFINID:ZDB-GENE-090313-382 Length:859 Species:Danio rerio


Alignment Length:936 Identity:342/936 - (36%)
Similarity:500/936 - (53%) Gaps:124/936 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VDQVELDQQQQPGSSSTVSGSTPPLQISPHGSPSLQQSQRLGKHLSKSASEL--------NGHDC 66
            ||.|....|||         :...|..|.||...|..|.:|.|...|..|..        :|.| 
Zfish     7 VDDVSPSHQQQ---------NQRGLWKSFHGKSKLPGSPKLSKKARKPESVFRIFKKKRDHGLD- 61

  Fly    67 HLSESPHISPKRAKSAVAQQLAGVSSGGVASGVGVLQKTHGFFNNLRHRWSRAKSKDRLGRKSPS 131
                       ||.|:....|...::.|..||                       :.|.|....|
Zfish    62 -----------RAVSSSQPNLHSAAADGEGSG-----------------------RTRCGTPEMS 92

  Fly   132 DFLEESTDYAADYSSEGSSVTHSPRHRSTTIGGSP-------LAREFRATAKMAQVIQRFGGSME 189
                 :...||..:|.|:.:....|      .|||       |..:::..:......|......:
Zfish    93 -----ACTAAAAAASLGAEIQMLKR------SGSPKPTLSQLLESQYKPASTCTDDAQTHSDEEQ 146

  Fly   190 GRIDEHPENGSAGCSPPELSTQQQLEALQANELRRKREAQLRQFVFFQLRVHLKSGSDLVAMDKN 254
            |.........:.|...|.|.|.                      ..:||.:.||.|::|...|:.
Zfish   147 GDKSVGVTTVAKGAVQPALPTS----------------------TLYQLDIVLKRGNNLAIRDRA 189

  Fly   255 GLSDPYVKFKVGGRLLHKSRTIHRDLNPVWDEVFIVPIEDPFQPIIVKVFDYDWGLQDDFMGSAK 319
            |.||||||||:.|:.:.:|:.|.::|||||||...:.:::..:|:.:||||||:||||||||||.
Zfish   190 GTSDPYVKFKLAGKEVFRSKIIQKNLNPVWDERVCLIVDNLKEPLYMKVFDYDFGLQDDFMGSAY 254

  Fly   320 LDLTQLELGKAEDIHLQLCDSSGNGGSGLGEILINLTLWPRSQEDKE-MHFQRNSKLAESSKRL- 382
            |.|..||..:..|:.|.|.|.. .....||.:.:.:||:|||..|:| :..|:..::.:.|.|| 
Zfish   255 LYLESLEQQRPLDVRLDLQDPH-CPDQDLGSLELTVTLYPRSPADREALRQQQQQQMQQQSPRLS 318

  Fly   383 ----KSQIWSSVVTILLVKAKDLPLAEDGSKLNDTHFKFRLGNEKYKSKS---SWTERWLEQFDL 440
                |.|:|..:|:|.|::.::| :|.|.:..:|.:.||:||.:|||||:   :...:|.|||||
Zfish   319 DLHRKPQMWKGIVSIRLIEGRNL-IAMDQNGFSDPYVKFKLGPQKYKSKTIPKTLNPQWREQFDL 382

  Fly   441 HLFDEDQN-LEIALWN-----RNTLYGKAIIDLSVFQRENTHGIWKPLEDCPGEVHLMLTISGTT 499
            ||:||:.. |||::|:     |:...|:..::|....||.||.:...||:..|.:.:::|:: .|
Zfish   383 HLYDEEGGILEISVWDKDIGRRDDFIGQCELELWKLSREKTHKLELHLEEDKGTLVVLVTLT-AT 446

  Fly   500 ALETISDLKA-FKEDPREAQLLRERYKFLRCLQNLRDVGHLTVKVFGATGLAAADIGGKSDPFCV 563
            |..:||||.. ..:||.:.|.:..||..|:...||:|||.|.||:..|.||.|||:.|||||||:
Zfish   447 ATVSISDLSVNLLDDPDQRQHISRRYSPLKSFFNLKDVGILQVKILRAEGLMAADVTGKSDPFCI 511

  Fly   564 LELGNARLQTQTEYKTLTPNWNKIFTFNVKDITQVLEITVFDEDRDHRVEFLGKLVIPLLRIKSG 628
            .||.|.||||.|.||||.|.|||:|:||||||..||||:|:|||||...:||||:.||||.|.|.
Zfish   512 AELCNDRLQTHTVYKTLNPEWNKVFSFNVKDIHSVLEISVYDEDRDRSADFLGKVAIPLLNICSS 576

  Fly   629 VKRWYTLKDKNLCVRAKGNSPQIQLELTVVWSEIRAVCRALQPKEEKLIQQEAKFKRQLFLRNVN 693
            .::.|.||:|.|....||   .|.|:..|:::.:||..|...|.|:|.|::|||..:||..:|.|
Zfish   577 QQKAYVLKNKELTGPTKG---VILLQADVIFNAVRASLRTFVPAEQKYIEEEAKVSKQLLQQNFN 638

  Fly   694 RLKEIIMDILDAARYVQSCFEWESPVRSSIAFVFWIVACVYGDLETVPLVLLLIILKNWLVRLIT 758
            |:|..::.:::...|:.|||:||||.||..||:.::|.....::..:||.|||:::.|:| |..:
Zfish   639 RVKRCVLFLINVGYYINSCFQWESPRRSLCAFLIFVVVVWNFEIYMLPLSLLLLLIWNYL-RKAS 702

  Fly   759 GTTDAAAHYDYEYD--EDDDDDKEKE----EKKSIKERLQAIQEVSQTVQNTIGYLASLGESTIN 817
            |......:.:...|  ||.|:|.:||    |||...::..|||:|..|||..:..:||.||...|
Zfish   703 GKGTCEGNVEVMEDLLEDVDEDSDKEDKDSEKKGFLDKFYAIQDVIITVQTALDEVASFGERVKN 767

  Fly   818 TFNFSVPELTWLAVVLLLGAILVLHFVPLRWLLLFWGLMKFSRRLLRPNTIPNNELLDFLSRVPD 882
            |||:|||.|:|||:.:|.....:.:|:|||:::|.||:.||:::|..|.:|.||||||||||||.
Zfish   768 TFNWSVPFLSWLAITVLCAGATITYFIPLRYIVLVWGINKFTKKLRAPYSINNNELLDFLSRVPS 832

  Fly   883 NEEINQYRELPPSA---PTDQTRNNP 905
            :.::.||:||...|   |..:.||||
Zfish   833 DIQMVQYKELKADANQSPNKKRRNNP 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MctpNP_001261078.1 C2A_MCTP_PRT 237..357 CDD:176007 53/119 (45%)
C2B_MCTP_PRT 390..497 CDD:176022 41/115 (36%)
C2C_MCTP_PRT 537..658 CDD:176023 69/120 (58%)
PRT_C <789..893 CDD:285560 50/103 (49%)
mctp1bXP_002663716.2 C2A_MCTP_PRT 172..293 CDD:176007 55/121 (45%)
C2B_MCTP_PRT 330..445 CDD:176022 41/116 (35%)
C2C_MCTP_PRT 485..603 CDD:176023 69/120 (58%)
PRT_C <751..>804 CDD:285560 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575964
Domainoid 1 1.000 128 1.000 Domainoid score I5264
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H75211
Inparanoid 1 1.050 531 1.000 Inparanoid score I1179
OMA 1 1.010 - - QHG59961
OrthoDB 1 1.010 - - D139564at33208
OrthoFinder 1 1.000 - - FOG0002654
OrthoInspector 1 1.000 - - otm24820
orthoMCL 1 0.900 - - OOG6_101057
Panther 1 1.100 - - O PTHR45911
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

Return to query results.
Submit another query.