DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp12b2 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_611370.2 Gene:Cyp12b2 / 37163 FlyBaseID:FBgn0034387 Length:535 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:516 Identity:118/516 - (22%)
Similarity:195/516 - (37%) Gaps:113/516 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KWQQARSFGEIPGPSLLRMLSFFMPGGALRNTNLIQMN-RLMREMYGDIYCI------------P 97
            :|...|..| :.||....:|..|:  .:|.|.....:. |...:.:|.||..            |
 Worm    23 QWTFWRRRG-VVGPMGFPVLGVFL--NSLDNNFPFPLQCREWTKKFGKIYGFTEGTLKTLVISDP 84

  Fly    98 GMMGKPNAVFTYNPDDFEMTYRNEGVWPIRIGLESLNYYRKIHRPDVFKGVGGLASDQGQEWADI 162
            .::   :.||....|:|....||    ||:...|      |..|.::|       :.||..|..:
 Worm    85 ELV---HEVFVTQYDNFYGRKRN----PIQGDSE------KEKRTNLF-------AAQGFRWKRL 129

  Fly   163 RNKVNPVLMKVQNVRQNLPQLDQISKEFIDKLETQRNPETHTLTTDFHNQLKMWAFESISFVALN 227
            |...:|.... .::|:....::..:.|.:..:|.|...........|:.:   :..:.|..:|:.
 Worm   130 RAISSPTFSN-SSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFYQE---FTLDVIGRIAMG 190

  Fly   228 TRMGLLSDNP-DPNADRLAKHMRDFFNYSFQFDVQPSIWTF------------YKTAGFKKFLKT 279
            .....:..|| .|...:|.:.     |::..|.:.....||            .|...|:|    
 Worm   191 QTDSQMFKNPIMPIVSKLFQG-----NFAKLFLIGGIFPTFLVEIIRQILLKNLKVGSFRK---- 246

  Fly   280 YDNITDITSNYIETAMR-------------------------------GFGKN--DDGKTKCVLE 311
               |.:||.:.|...::                               .||:|  |..|:.....
 Worm   247 ---INEITLDAIHNRIKQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTN 308

  Fly   312 QLLEHNKKVAVTMVMDMLMAGIDTTSSACLTILYHLARNPSKQEKLRRELLRILPTTKDSLTDQN 376
            :.|...:.|....|  .|:||.|||:.:.....|.||.:|..|:||:.|:.|..|..:.:: ||.
 Worm   309 RQLTTEEIVGQCTV--FLIAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPNPEVTI-DQL 370

  Fly   377 TKNMPYLRACIKEGLRITSITP-GNFRITPKDLVLSGYQVPRGTGVLMGVLELSNDDKYFAQSSE 440
            :| :.|:....||.||:..:.. .|.|...::..|...:|..||.:.:....|..|...:...:|
 Worm   371 SK-LKYMECVFKEALRLYPLGAFANSRRCMRNTKLGNMKVEVGTMIQVDTWTLHTDPNIWGDDAE 434

  Fly   441 -FIPERWLKSDLAPDIQACPAARTRNPFVYLPFGFGPRTCIGKRIAELEIETLLVRLLRSY 500
             |.||||         |...:.:......|:|||.|||.|||.|:|.:|.:.|||.:||.:
 Worm   435 DFKPERW---------QTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKF 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12b2NP_611370.2 p450 59..511 CDD:299894 114/503 (23%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 108/472 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4820
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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