DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp12b2 and cyp11a1

DIOPT Version :9

Sequence 1:NP_611370.2 Gene:Cyp12b2 / 37163 FlyBaseID:FBgn0034387 Length:535 Species:Drosophila melanogaster
Sequence 2:XP_017947884.2 Gene:cyp11a1 / 100495360 XenbaseID:XB-GENE-960779 Length:504 Species:Xenopus tropicalis


Alignment Length:540 Identity:148/540 - (27%)
Similarity:238/540 - (44%) Gaps:70/540 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SGNQLWFNRNSSVG-----GTLSQQTQLELADSRIDEKWQQARSFGEIPGPSLLRMLSFFMPGGA 73
            ||.:| .:.:|.||     |||| |....|..:::...|::          ..|.:..|:...| 
 Frog    12 SGLRL-ISHHSVVGAGPEMGTLS-QVDTPLPYNQMPGNWKR----------GWLELYRFWRKDG- 63

  Fly    74 LRNTNLIQMNRLMREMYGDIYCIPGMMGKPNAVFTYNPDDFEMTYRNEGVWPIRIGLESLNYYRK 138
            ..|.:...|....|  :|.||  ...:|..::||...|:|....:..||:.|.|:.:.....|| 
 Frog    64 FHNIHYHMMENFQR--FGPIY--REALGIYDSVFIQLPEDAATLFHVEGLHPERLRVPPWYEYR- 123

  Fly   139 IHRPDVFKGVGGLASDQGQEWADIRNKVNPVLMKVQNVRQNLPQLDQISKEFIDK--LETQRNPE 201
                |......|:...:|::|...|..:|..::.:..:.:.||.||.:.::|:.:  ::.:|:..
 Frog   124 ----DYRNRRYGVLLKKGEDWRSHRIALNREVLSMSAMSRFLPLLDSVGQDFVHRAHIQVERSGR 184

  Fly   202 THTLTTDFHNQLKMWAFESISFVALNTRMGLLSDNPDPNADRLAKHMRDFFNY---------SFQ 257
             ...|.|..|:|..:|.||:.:|....|:|||.|..||.:.:....:...||.         |..
 Frog   185 -GKWTADLTNELFRFALESVCYVLYGQRLGLLQDYIDPESQQFIDSVSLMFNTTAPMLYLPPSLL 248

  Fly   258 FDVQPSIWTFYKTAGFKKFLKTYDNITDITSNYIETAMRGFGKNDDGKTKCVLEQLLEHNK---- 318
            ..:..|||        |..::.:|.|.......|:.......:..|.....||..||..::    
 Frog   249 RKINSSIW--------KDHVRAWDAIFTHADRCIQQIYSSLRQQSDSTYSGVLSSLLLQDQMPLE 305

  Fly   319 --KVAVTMVMDMLMAGIDTTSSACLTILYHLARNPSKQEKLRRELLRILPTTKDSLTDQNTKNMP 381
              |.:||   :::..|:||||......:|.|||.||.|||||.|::.....:...|| ...|.:|
 Frog   306 DIKASVT---ELMAGGVDTTSMTLQWAMYELARTPSVQEKLRSEVIAARDASGKDLT-ALLKRIP 366

  Fly   382 YLRACIKEGLRITSITPGNFRITPKDLVLSGYQVPRGTGVLMGVLELSNDDKYFAQSSEFIPERW 446
            .::|.:||.||:..:.....|.|.:|.|:..|.:|:||.|.:|:..:..:...||....|.||||
 Frog   367 LVKAALKETLRLHPVAITLQRYTQRDTVIRNYIIPQGTLVQVGLYAMGRNPDIFALPQRFSPERW 431

  Fly   447 LKSDLAPDIQACPAARTRNPFVYLPFGFGPRTCIGKRIAELEIETLLVRLLRSYKVSWLPETPIE 511
            |..  .|           ..|..|.||||||.|||:||||:|::..|:.:|.::|:.......:.
 Frog   432 LGG--GP-----------THFRGLGFGFGPRQCIGRRIAEIEMQLFLIHILENFKIEINRMVDVG 483

  Fly   512 YESTIILSPCGDIRFKLEPV 531
            ....:||.|...|...|.|:
 Frog   484 TTFNLILFPSKPIHLTLRPL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp12b2NP_611370.2 p450 59..511 CDD:299894 129/468 (28%)
cyp11a1XP_017947884.2 cytochrome_P450 75..497 CDD:425388 127/456 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9361
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.