DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hs3st-A and Ndst1

DIOPT Version :9

Sequence 1:NP_001286589.1 Gene:Hs3st-A / 37161 FlyBaseID:FBgn0053147 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_077337.1 Gene:Ndst1 / 29633 RGDID:69303 Length:882 Species:Rattus norvegicus


Alignment Length:602 Identity:131/602 - (21%)
Similarity:215/602 - (35%) Gaps:182/602 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QHAQPNEYQQLLQHPHH------HYQQHYSGNNNTSGNNSNSSNTQQY-HQRQQQHQATLRDCSV 100
            :|..|.:....:. |||      |.|.:.:.....   |...::|::| |.:..:::...     
  Rat   418 EHGIPTDMGYAVA-PHHSGVYPVHVQLYEAWKQVW---NIRVTSTEEYPHLKPARYRRGF----- 473

  Fly   101 KLPLDILWLPKSAM-----------RPAGPDTSPTDCILVVGVSRPKLAVVFLTVML--ISLFLT 152
             :...|:.||:...           .|.|  :|..|.|:..|       .:||||:|  ||:|:|
  Rat   474 -IHNGIMVLPRQTCGLFTHTIFYNEYPGG--SSELDKIINGG-------ELFLTVLLNPISVFMT 528

  Fly   153 FHVLYDS---AVYNIQ-AAQAVHERHRLSM-TASASALASSSSSSSNSGSSFSSAGGASNHLPVF 212
            ....|.:   .:|..: ..:.:|....|.: |.....||.......:....           |::
  Rat   529 HLSNYGNDRLGLYTFKHLVRFLHSWTNLRLQTLPPVQLAQKYFQIFSEEKD-----------PLW 582

  Fly   213 VKPVPSSNQLSHPMVFPSSRVHFPKTSRRLPQALIIGVRKCGTRALLEMLYLHPRI------QKA 271
            ..|.....   |..::...     ||..|.|:.||||.:|.||.||...|.:||.:      .:.
  Rat   583 QDPCEDKR---HKDIWSKE-----KTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSET 639

  Fly   272 GGEVHFFDRDENYLKGLEWYRK--KMPHSFRGQITIEKSPSYFVSPEVPERVRAMNASIKLLLIV 334
            ..|:.||: ..||.||::||.:  .:|.:.......|||.:||.|...|.|..|:....|:|.|:
  Rat   640 FEEIQFFN-GHNYHKGIDWYMEFFPIPSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKVLTIL 703

  Fly   335 REPVTRAISDYTQLRSHAATAILPLAEKDPPSPRESSGGGAGGGGAGGGGGSGTAAAKMPTQSLL 399
            ..|..||.|.|...|:|           |.|                       .|.|.....::
  Rat   704 INPADRAYSWYQHQRAH-----------DDP-----------------------VALKYTFHEVI 734

  Fly   400 YAKLQSARGYDNALLGGSGAGAKETKGKTVSSSLVRRQALGSGGGVAGAAMTTTTMSPMASAAQM 464
                                    |.|...||.|                               
  Rat   735 ------------------------TAGPDASSKL------------------------------- 744

  Fly   465 AAKSFEELAIFPNGTVNEAYRPLSISMYHVHLHRWLEVFPREQLLVVNGDRLIEDPVSQLKRIEA 529
              ::.:...:.|             ..|..|:.|||..|...|:||::|..|..:|...:..::.
  Rat   745 --RALQNRCLVP-------------GWYATHIERWLSAFHANQILVLDGKLLRTEPAKVMDTVQK 794

  Fly   530 FLGIEHRVN-SEHFYFNETKGFYCLRYDNG-DRCLRETKGRKHPHVDPVVVSRLRKFFAEYNQRF 592
            |||:...|: .:...|:..|||:|...:.| .:||.::||||:|.:|....:.|:.::.::|...
  Rat   795 FLGVTSTVDYHKTLAFDPKKGFWCQLLEGGKTKCLGKSKGRKYPEMDLDSRAFLKDYYRDHNIEL 859

  Fly   593 YEL---VGEDL-GWPEE 605
            .:|   :|:.| .|..|
  Rat   860 SKLLYKMGQTLPTWLRE 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hs3st-ANP_001286589.1 Sulfotransfer_1 242..587 CDD:304426 83/354 (23%)
Ndst1NP_077337.1 HSNSD 30..515 CDD:288882 20/115 (17%)
Heparan sulfate N-deacetylase 1 40..598 39/212 (18%)
Heparan sulfate N-sulfotransferase 1 599..882 92/383 (24%)
Sulfotransfer_1 605..855 CDD:279075 83/354 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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