DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hs3st-A and Ndst1

DIOPT Version :9

Sequence 1:NP_001286589.1 Gene:Hs3st-A / 37161 FlyBaseID:FBgn0053147 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001335029.1 Gene:Ndst1 / 15531 MGIID:104719 Length:882 Species:Mus musculus


Alignment Length:601 Identity:134/601 - (22%)
Similarity:213/601 - (35%) Gaps:180/601 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QHAQPNEYQQLLQHPHHH--YQQH---YSGNNNTSGNNSNSSNTQQY-HQRQQQHQATLRDCSVK 101
            :|..|.:....:. |||.  |..|   |.......|....|  |::| |.:..:::...      
Mouse   418 EHGIPTDMGYAVA-PHHSGVYPVHVQLYEAWKQVWGIRVTS--TEEYPHLKPARYRRGF------ 473

  Fly   102 LPLDILWLPKSAM-----------RPAGPDTSPTDCILVVGVSRPKLAVVFLTVML--ISLFLTF 153
            :...|:.||:...           .|.|  :|..|.|:..|       .:||||:|  ||:|:|.
Mouse   474 IHNGIMVLPRQTCGLFTHTIFYNEYPGG--SSELDKIINGG-------ELFLTVLLNPISIFMTH 529

  Fly   154 HVLYDS---AVYNIQ-AAQAVHERHRLSM-TASASALASSSSSSSNSGSSFSSAGGASNHLPVFV 213
            ...|.:   .:|..: ..:.:|....|.: |.....||.......:....           |::.
Mouse   530 LSNYGNDRLGLYTFKHLVRFLHSWTNLRLQTLPPVQLAQKYFQIFSEEKD-----------PLWQ 583

  Fly   214 KPVPSSNQLSHPMVFPSSRVHFPKTSRRLPQALIIGVRKCGTRALLEMLYLHPRI------QKAG 272
            .|.....   |..::...     ||..|.|:.||||.:|.||.||...|.:||.:      .:..
Mouse   584 DPCEDKR---HKDIWSKE-----KTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLSSNYPSSETF 640

  Fly   273 GEVHFFDRDENYLKGLEWYRK--KMPHSFRGQITIEKSPSYFVSPEVPERVRAMNASIKLLLIVR 335
            .|:.||: ..||.||::||.:  .:|.:.......|||.:||.|...|.|..|:....|:|.|:.
Mouse   641 EEIQFFN-GHNYHKGIDWYMEFFPIPSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKILSILI 704

  Fly   336 EPVTRAISDYTQLRSHAATAILPLAEKDPPSPRESSGGGAGGGGAGGGGGSGTAAAKMPTQSLLY 400
            .|..||.|.|...|:|           |.|                       .|.|.....:: 
Mouse   705 NPADRAYSWYQHQRAH-----------DDP-----------------------VALKYTFHEVI- 734

  Fly   401 AKLQSARGYDNALLGGSGAGAKETKGKTVSSSLVRRQALGSGGGVAGAAMTTTTMSPMASAAQMA 465
                                   |.|...||.|                                
Mouse   735 -----------------------TAGPDASSKL-------------------------------- 744

  Fly   466 AKSFEELAIFPNGTVNEAYRPLSISMYHVHLHRWLEVFPREQLLVVNGDRLIEDPVSQLKRIEAF 530
             ::.:...:.|             ..|..|:.|||..|...|:||::|..|..:|...:..::.|
Mouse   745 -RALQNRCLVP-------------GWYATHIERWLSAFHANQILVLDGKLLRTEPAKVMDTVQKF 795

  Fly   531 LGIEHRVN-SEHFYFNETKGFYCLRYDNG-DRCLRETKGRKHPHVDPVVVSRLRKFFAEYNQRFY 593
            ||:...|: .:...|:..|||:|...:.| .:||.::||||:|.:|....:.|:.:|.::|....
Mouse   796 LGVTSTVDYHKTLAFDPKKGFWCQLLEGGKTKCLGKSKGRKYPEMDLDSRAFLKDYFRDHNIELS 860

  Fly   594 EL---VGEDL-GWPEE 605
            :|   :|:.| .|..|
Mouse   861 KLLYKMGQTLPTWLRE 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hs3st-ANP_001286589.1 Sulfotransfer_1 242..587 CDD:304426 84/354 (24%)
Ndst1NP_001335029.1 HSNSD 30..515 CDD:403326 22/114 (19%)
Heparan sulfate N-deacetylase 1 40..598 41/211 (19%)
Heparan sulfate N-sulfotransferase 1 599..882 93/383 (24%)
Sulfotransfer_1 605..855 CDD:395556 84/354 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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