DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17821 and Elovl3

DIOPT Version :10

Sequence 1:NP_725820.2 Gene:CG17821 / 37159 FlyBaseID:FBgn0034383 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001101072.1 Gene:Elovl3 / 309449 RGDID:1307263 Length:271 Species:Rattus norvegicus


Alignment Length:293 Identity:79/293 - (26%)
Similarity:134/293 - (45%) Gaps:57/293 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNFTLLDLFRGLPAD---PVHLPMFGTPLP--------AIVIVLGYLLLIFKVGPDFMRSRKPYN 54
            |||:     |||..:   |....|.....|        :..|||.|||||. .|.::|::||.::
  Rat     5 MNFS-----RGLKTELIQPYDFEMSQDLRPFLEEYWVSSFFIVLVYLLLII-FGQNYMKTRKGFS 63

  Fly    55 MRKAMLIYNFCQVLMNSGIFLMGTY--------YLFIKKLYDFRCMTMLSSDHPDKDVDRLLTYF 111
            :::.:::::||..:.:    ::||.        .||...|....|.|    |:.:..:.:..::.
  Rat    64 LQRPLILWSFCLAIFS----ILGTLRMWKFMGTVLFTMGLKQTVCFT----DYTNDAIVKFWSWV 120

  Fly   112 YFINKVIDLIDTIFFVLRKSNKQITVLHVYHHVFMVLGVPLTYYFYGPGGQYNLMGYLNSFVHVV 176
            :.::||::|.||.|.:|||  :.:..:|.|||..::|.....|....|.|.:.:.  :|..||.|
  Rat   121 FLLSKVVELGDTAFIILRK--RPLIFVHWYHHSTVLLFTSFGYKNKVPSGGWFMT--MNLGVHSV 181

  Fly   177 MYAYY---FASAWYPNVKSTFWWKEYITKLQFLQFMILFAQSVLT-LWLNP-GCRFPK---VLQY 233
            ||.||   .|...:||:...     .||.||.||.::.....:|. :|... ||....   ...:
  Rat   182 MYTYYTMKAAKVKHPNILPM-----VITSLQILQMVLGTIFGILNYIWRQERGCYTTSEHFFWSF 241

  Fly   234 VQLGGSVSMMTMFGNFYYQTYV----KAKSKEQ 262
            |..|   :...:|..|:::.|:    ||:||.|
  Rat   242 VLYG---TYFILFAQFFHRAYLRPKRKAESKSQ 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17821NP_725820.2 ELO 20..262 CDD:460083 71/269 (26%)
Elovl3NP_001101072.1 ELO 30..266 CDD:460083 65/256 (25%)

Return to query results.
Submit another query.