DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17821 and elo1

DIOPT Version :10

Sequence 1:NP_725820.2 Gene:CG17821 / 37159 FlyBaseID:FBgn0034383 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_592859.3 Gene:elo1 / 2543177 PomBaseID:SPAC1639.01C Length:365 Species:Schizosaccharomyces pombe


Alignment Length:257 Identity:71/257 - (27%)
Similarity:111/257 - (43%) Gaps:36/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PLPAIVIVLGYLLLIFKVGPDFMRSRKPYNMRKAMLIYNFCQVLMNSGIFLMGTYYLFIKKLYDF 89
            |:.|.:|:..|||::  ||...||:|:|..::|....||. ...:.|.|..:..:......:|..
pombe    73 PVVATIIISYYLLIL--VGGRIMRNRQPIRLQKIFQYYNL-TFSIASAILALLIFEQVAPAIYKH 134

  Fly    90 RCMTMLSSDHPDKDVDRLLTYFYFINKVIDLIDTIFFVLRKSNKQITVLHVYHHVFMVLGVPLTY 154
            .....:.::.........|.|..:|:|.::|.||.|.||||  |.:..||.|||     |.....
pombe   135 GFFFSICNEKAWTQPLVFLYYCAYISKFLELTDTFFLVLRK--KPLQFLHCYHH-----GATAVL 192

  Fly   155 YFYGPGGQYN---LMGYLNSFVHVVMYAYYFASAWYPNVKSTFWWKEYITKLQFLQF-----MIL 211
            .:....|:.:   |:..:|..|||.||.||:..|....|.    ||:::|:.|.:||     .|.
pombe   193 VYTQIVGRTSISWLIIEINLLVHVTMYYYYYLVAKGIRVP----WKKWVTRFQIVQFFADLGFIY 253

  Fly   212 FA---QSVLTLWLNPGCR-----FPKVLQYVQLGGSVSMMTMFGNFYYQTY-----VKAKSK 260
            ||   :....|.....|.     .| :..:..|....|.:.:|..||:.||     :|.|:|
pombe   254 FAVYTEVAYRLKFYKACMGHCSGHP-LAAFCGLATISSYLVLFIVFYHNTYKKNAALKMKAK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17821NP_725820.2 ELO 20..262 CDD:460083 71/257 (28%)
elo1NP_592859.3 ELO 69..303 CDD:460083 66/244 (27%)

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