DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17821 and elo-3

DIOPT Version :10

Sequence 1:NP_725820.2 Gene:CG17821 / 37159 FlyBaseID:FBgn0034383 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001367447.1 Gene:elo-3 / 183948 WormBaseID:WBGene00001241 Length:320 Species:Caenorhabditis elegans


Alignment Length:240 Identity:58/240 - (24%)
Similarity:100/240 - (41%) Gaps:31/240 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 YLLLIFKVGPDFMRSRKPYNMRKAMLIYN-FCQVLMNSGIFLMGTYYLFIKKLYDFRCMTMLSSD 98
            |:.:|| .|...|...||:.:...:.::| |..:....|...|...:::............:...
 Worm    48 YVAVIF-TGKKIMEKYKPFQLDTPLFVWNSFLAIFSILGFLRMTPEFVWSWSAEGNSFKYSICHS 111

  Fly    99 HPDKDVDRLLTYFYFINKVIDLIDTIFFVLRKSNKQITVLHVYHHVFMVLGVPLTYYFYGPGGQY 163
            ...:.|....|..:.::|:.:||||||.||||  :.:..||.||||.:::.....|..:...|::
 Worm   112 SYAQGVTGFWTEQFAMSKLFELIDTIFIVLRK--RPLIFLHWYHHVTVMIYTWHAYKDHTASGRW 174

  Fly   164 NLMGYLNSFVHVVMYAYY-FASAWYPNVKSTFWWKEYITKLQFLQFM--ILFAQSVLTL------ 219
            .:  ::|..||.:||:|| ..|..:...|.   ....:|.||..|.:  ::...:|..:      
 Worm   175 FI--WMNYGVHALMYSYYALRSLKFRLPKQ---MAMVVTTLQLAQMVMGVIIGVTVYRIKSSGEY 234

  Fly   220 ----WLNPGCRFPKVLQYVQLGGSVSMMTMFGNFYYQTYVKAKSK 260
                |.|.|..|.....|         ..:|.||:|..|||..::
 Worm   235 CQQTWDNLGLCFGVYFTY---------FLLFANFFYHAYVKKNNR 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17821NP_725820.2 ELO 20..262 CDD:460083 58/240 (24%)
elo-3NP_001367447.1 ELO 33..270 CDD:460083 58/238 (24%)

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