DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a3

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_571830.1 Gene:slc6a3 / 80787 ZFINID:ZDB-GENE-010316-1 Length:629 Species:Danio rerio


Alignment Length:544 Identity:203/544 - (37%)
Similarity:314/544 - (57%) Gaps:15/544 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEIS 77
            |:.:..|.||..::||.|.|..:|.|.|:|||||:.::||||.|::|||:.:::.|.|::|:|::
Zfish    71 PSGQQRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELA 135

  Fly    78 LGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESW 142
            |||:...|....:.:.|:.|||....:|.:....:||:.|:|..|.:..:||..||||..|..:|
Zfish   136 LGQYNREGAAGVWKICPIFKGVGFTVILISLYVGSYYNVIIAWALFYLFSSFSGELPWIHCNNTW 200

  Fly   143 GT-DCHDGNAQ--NSSGKMSPAQLYFEREIL--HEVPNIDNGLSLPNWQLVACLAIAWLVIGGVL 202
            .: :|.|.||.  |.:.|.:||..||||.:|  ||...||: |..|.|||.||||:..:|:...|
Zfish   201 NSPNCSDPNATLLNDTYKTTPALEYFERGVLHVHESSGIDD-LGAPRWQLTACLAVVIVVLYFSL 264

  Fly   203 IRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFF 267
            .:|:|:|||..:.....|||||.:||||.||||||||||..:....:..|.:..||..|.||:.|
Zfish   265 WKGVKTSGKVVWITATMPYVVLTVLLLRGVTLPGAIDGIKAYLSVDFLRLYDAQVWIEAATQICF 329

  Fly   268 SLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGSVVK 332
            ||.:.||.||.::|||.|:.|.|.|.:|.::::|.:|..:|.:.|..||.:::: .|..:..|..
Zfish   330 SLGVGFGVLIAFSSYNKFSNNCYRDAIITSSINSLTSFFSGFVIFSFLGYMSQK-HNVALDKVAT 393

  Fly   333 GGAGLAFISYPEAIAKFEYVP--QMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIW 395
            .|.||.||.||||||.   :|  .::||:||:||..|||.|.:|....::..:.|:|........
Zfish   394 DGPGLVFIIYPEAIAT---LPGSSVWAVIFFIMLLTLGIDSAMGGMESVITGLIDEFKFLHKHRE 455

  Fly   396 KLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFM 460
            .....:.|..|.:|::.:|.||.::..|:|.:....:.|...:.|.:.:||.|||:||.:||:.|
Zfish   456 LFTLFIVVSTFLISLICVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGIAWFYGVDRFSDDIEEM 520

  Fly   461 MGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWA 525
            :|...|.||||||:|::|..:..:::......:..:|....:||.|.:.|..|:...:|.:|   
Zfish   521 IGQRPGLYWRLCWKFVSPCFLLFMVVVSFATFNPPKYGSYYFPTWATMVGWCLSISSMIMVP--- 582

  Fly   526 IYAIYKKRGHNGSFWQRIRAACKP 549
            :||.||.....|||..::..|..|
Zfish   583 LYAFYKFCSLPGSFCDKLAYAITP 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 185/476 (39%)
slc6a3NP_571830.1 SLC6sbd_DAT1 76..623 CDD:212083 202/539 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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