DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a19

DIOPT Version :10

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001034811.2 Gene:Slc6a19 / 664630 RGDID:1594328 Length:634 Species:Rattus norvegicus


Alignment Length:642 Identity:200/642 - (31%)
Similarity:326/642 - (50%) Gaps:109/642 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQLEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALL 65
            :.:||:.:| |:.:.:|  :|.|..:::.:|:...|||||:|||||:...:|||.|:||:||.|:
  Rat    18 LDELEVIEK-EEASSRP--KWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLV 79

  Fly    66 VIGRPVYYLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASF 129
            :.|.|:.:||.::||...:|.|..: .:.|.||||.:..:..:.....||::|:|..:.::..||
  Rat    80 LEGIPLLHLEFAIGQRLRKGSVGVWSSIHPALKGVGIASMFVSFMVGLYYNTIIAWVMWYFFNSF 144

  Fly   130 GSELPWSRCWESWGTDCHDGNAQNSSG------KMSPAQLYFEREILHEVPNIDNGLSLPNWQLV 188
            ...||||.|..:          ||.:|      |.|....::.||.|:...:|.:..|: .|.::
  Rat   145 QEPLPWSECPLN----------QNQTGYVEECAKSSSVDYFWYRETLNISTSISDSGSI-QWWIL 198

  Fly   189 ACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELL 253
            .||..||.|:....||||:::|||.|.....|||||.|.|:|.:||.||.:||::.|.|...||.
  Rat   199 LCLTCAWSVLYVCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNGIVFLFTPNITELS 263

  Fly   254 NPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNL 318
            ||..|..|..|||:|.::.||.||:::|||:.:.|...|.||::.::..:|:.|..:.:.|:|..
  Rat   264 NPNTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEMDSVIVSIINGFTSVYAATVVYSIIGFR 328

  Fly   319 ARE----TGNPDIGSVVKG---------------------------------------------- 333
            |.|    ..|.:|.:::.|                                              
  Rat   329 ATERFDDCVNTNILTLINGFDLPEGNVTAENFEAYQHWCNATNPEAYAQLTFQTCDINTFLSEGV 393

  Fly   334 -GAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLR-SPPIW- 395
             |.|||||.:.|||.|....| :::||||:|||.||:.|..|....::..::|   |. :|..| 
  Rat   394 EGTGLAFIVFTEAITKMPVSP-LWSVLFFIMLFCLGLSSMFGNMEGVVVPLQD---LNITPKKWP 454

  Fly   396 -KLASGLTVLG-FSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIK 458
             :|.:||..|| :.::.::....||:.|:|:|.|..|...||:|..|:.||.::|||:||.:||:
  Rat   455 KELLTGLICLGTYLIAFIFTLNSGQYWLSLLDSYAGSIPLLIIAFCEMFAVVYVYGVDRFNKDIE 519

  Fly   459 FMMGIETGWYWRLCWRFITPGLMTAV------------LIYMLLDMSALEY---KGVGYPTLAHV 508
            ||:|.:...:|::.||.::|.:|..:            |:|.:.|....|:   :.|.||...:.
  Rat   520 FMIGHKPNIFWQVTWRVVSPLIMLVIFLFFFVIEVNKQLMYSVWDPDYEEFPKSQKVPYPDWVYA 584

  Fly   509 FGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAAC-KPSDTWGPANVQLDATI 564
            ....:|.:..:.:|.:|||.:             ||..| |..|..|..|....|::
  Rat   585 VVVIVAGVPCLTIPCFAIYKL-------------IRNYCQKSGDQHGLVNALSTASV 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 177/543 (33%)
Slc6a19NP_001034811.2 SLC5-6-like_sbd 32..612 CDD:444915 191/609 (31%)

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