DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a19

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001034811.2 Gene:Slc6a19 / 664630 RGDID:1594328 Length:634 Species:Rattus norvegicus


Alignment Length:642 Identity:200/642 - (31%)
Similarity:326/642 - (50%) Gaps:109/642 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQLEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALL 65
            :.:||:.:| |:.:.:|  :|.|..:::.:|:...|||||:|||||:...:|||.|:||:||.|:
  Rat    18 LDELEVIEK-EEASSRP--KWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLV 79

  Fly    66 VIGRPVYYLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASF 129
            :.|.|:.:||.::||...:|.|..: .:.|.||||.:..:..:.....||::|:|..:.::..||
  Rat    80 LEGIPLLHLEFAIGQRLRKGSVGVWSSIHPALKGVGIASMFVSFMVGLYYNTIIAWVMWYFFNSF 144

  Fly   130 GSELPWSRCWESWGTDCHDGNAQNSSG------KMSPAQLYFEREILHEVPNIDNGLSLPNWQLV 188
            ...||||.|..:          ||.:|      |.|....::.||.|:...:|.:..|: .|.::
  Rat   145 QEPLPWSECPLN----------QNQTGYVEECAKSSSVDYFWYRETLNISTSISDSGSI-QWWIL 198

  Fly   189 ACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELL 253
            .||..||.|:....||||:::|||.|.....|||||.|.|:|.:||.||.:||::.|.|...||.
  Rat   199 LCLTCAWSVLYVCTIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNGIVFLFTPNITELS 263

  Fly   254 NPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNL 318
            ||..|..|..|||:|.::.||.||:::|||:.:.|...|.||::.::..:|:.|..:.:.|:|..
  Rat   264 NPNTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEMDSVIVSIINGFTSVYAATVVYSIIGFR 328

  Fly   319 ARE----TGNPDIGSVVKG---------------------------------------------- 333
            |.|    ..|.:|.:::.|                                              
  Rat   329 ATERFDDCVNTNILTLINGFDLPEGNVTAENFEAYQHWCNATNPEAYAQLTFQTCDINTFLSEGV 393

  Fly   334 -GAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLR-SPPIW- 395
             |.|||||.:.|||.|....| :::||||:|||.||:.|..|....::..::|   |. :|..| 
  Rat   394 EGTGLAFIVFTEAITKMPVSP-LWSVLFFIMLFCLGLSSMFGNMEGVVVPLQD---LNITPKKWP 454

  Fly   396 -KLASGLTVLG-FSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIK 458
             :|.:||..|| :.::.::....||:.|:|:|.|..|...||:|..|:.||.::|||:||.:||:
  Rat   455 KELLTGLICLGTYLIAFIFTLNSGQYWLSLLDSYAGSIPLLIIAFCEMFAVVYVYGVDRFNKDIE 519

  Fly   459 FMMGIETGWYWRLCWRFITPGLMTAV------------LIYMLLDMSALEY---KGVGYPTLAHV 508
            ||:|.:...:|::.||.::|.:|..:            |:|.:.|....|:   :.|.||...:.
  Rat   520 FMIGHKPNIFWQVTWRVVSPLIMLVIFLFFFVIEVNKQLMYSVWDPDYEEFPKSQKVPYPDWVYA 584

  Fly   509 FGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAAC-KPSDTWGPANVQLDATI 564
            ....:|.:..:.:|.:|||.:             ||..| |..|..|..|....|::
  Rat   585 VVVIVAGVPCLTIPCFAIYKL-------------IRNYCQKSGDQHGLVNALSTASV 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 177/543 (33%)
Slc6a19NP_001034811.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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