DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment List and SLC6A12

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001116319.1 Gene:SLC6A12 / 6539 HGNCID:11045 Length:614 Species:Homo sapiens


Alignment Length:555 Identity:206/555 - (37%)
Similarity:313/555 - (56%) Gaps:28/555 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQ 80
            |...||.|.:||:.|.....:||||:|||||:.::||||.|.|||.|...|.|.||::||::|||
Human    34 KDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFIPYFIFFFVCGIPVFFLEVALGQ 98

  Fly    81 FTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGT 144
            :|.:|.|.|: .:.||.:|:.|..|:..:....||..|:|..|.:..:||.|||||:.|...|.|
Human    99 YTSQGSVTAWRKICPLFQGIGLASVVIESYLNVYYIIILAWALFYLFSSFTSELPWTTCNNFWNT 163

  Fly   145 D-CHDGNAQNSSGKM-------SPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIAWLVIGGV 201
            : |.|....:.:|.:       ||...::||.:|.....|.:..|| .|:|..||.:||::....
Human   164 EHCTDFLNHSGAGTVTPFENFTSPVMEFWERRVLGITSGIHDLGSL-RWELALCLLLAWVICYFC 227

  Fly   202 LIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVF 266
            :.:|:||:||..||...|||::|:|||:|.||||||..||||:.||....|.:|.||..|.||:|
Human   228 IWKGVKSTGKVVYFTATFPYLMLVILLIRGVTLPGAYQGIIYYLKPDLFRLKDPQVWMDAGTQIF 292

  Fly   267 FSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGSVV 331
            ||.|||.|.|....|||.::.|.|.|.:.:..::|.:|.:||.:.|.|||.:::|.|.| |..|.
Human   293 FSFAICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVP-ISEVA 356

  Fly   332 KGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQF-------GL 389
            :.|.|||||::|:|:.... :.|:::.|||:||..||:.|......|::....|.|       |.
Human   357 ESGPGLAFIAFPKAVTMMP-LSQLWSCLFFIMLIFLGLDSQFVCVECLVTASIDMFPRQLRKSGR 420

  Fly   390 RSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVS-FTALILAIGELVAVAWIYGVNRF 453
            |...|..:|    |:.:.:.:..:|.||.:|..|.|:|..| ...|.|::.|:|.::|:||.:||
Human   421 RELLILTIA----VMCYLIGLFLVTEGGMYIFQLFDYYASSGICLLFLSLFEVVCISWVYGADRF 481

  Fly   454 CEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGV-GYPTLAHVFGCFLATLG 517
            .::|:.|:|.......::.|.|:||||..|..::.|...:.|:|..| .||...:..|.|||...
Human   482 YDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLKYNNVYVYPPWGYSIGWFLALSS 546

  Fly   518 LIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDT 552
            ::.:|.:.:..:.|.|   |.|.:|:|....|..:
Human   547 MVCVPLFVVITLLKTR---GPFRKRLRQLITPDSS 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 187/486 (38%)
SLC6A12NP_001116319.1 SLC6sbd_BGT1 35..575 CDD:212080 204/549 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 576..614 0/3 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.