DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment List and si:ch211-283g2.1

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_017211707.1 Gene:si:ch211-283g2.1 / 569007 ZFINID:ZDB-GENE-060531-57 Length:581 Species:Danio rerio


Alignment Length:549 Identity:192/549 - (34%)
Similarity:299/549 - (54%) Gaps:21/549 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYL 74
            :::.|.:|.  |...:||..:.|..:|||||||||||:.:::|||.|::|||:.|:|:|.|:.::
Zfish     3 AKEEAGRPT--WSRQIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLLPYLLMLVVLGIPLLHM 65

  Fly    75 EISLGQFTGRGVVKAFDMA-PLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRC 138
            |::|||:..||.|.|...| ||.|||.:..|..:....|||:.|:...|.:..:||.|||.|..|
Zfish    66 ELTLGQYLRRGPVLALAKACPLFKGVGMATVAISFIMCTYYNIIITWALYYMFSSFRSELLWQNC 130

  Fly   139 WESWGT-DCHDGNAQNSSGKMSPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIAWLVIGGVL 202
            ..:|.| :|.| ...|||...:.:|.:|..::|.....::...:| .|:|...|.:||:::...:
Zfish   131 NNTWNTVNCTD-QVTNSSSSSTASQQFFNYKVLERTSGVEETGTL-RWELFLLLLLAWILVYLCI 193

  Fly   203 IRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFF 267
            .:|:||:||..||..:||||:||.||:..|.||||:|||.:|..|:|.:|||..||..|..|:|.
Zfish   194 FKGVKSTGKVVYFTALFPYVILLALLINNVQLPGALDGIKFFIIPEWDKLLNVQVWINAAAQIFN 258

  Fly   268 SLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGSVVK 332
            |:.|.||:|:..|||||:|.||..|.:.|...:|.:||.||.:.|...|.:: ...|..:..:..
Zfish   259 SIGIGFGSLMAMASYNNYNNNVLKDTLAIAITNSLTSIFAGFVIFSAFGYMS-HLQNVPVSEIAV 322

  Fly   333 GGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIWKL 397
            .|.||..:.||:|.......| ::|.|||.||..||:.|...|...::..:.|.:   |.||.|.
Zfish   323 DGPGLVLVVYPQAFVTMPVAP-LWAFLFFFMLLCLGLDSQFAMVEVMVTSLLDSY---SKPILKH 383

  Fly   398 ASG-----LTVLG--FSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCE 455
            ...     |.|.|  |.:.|..:...|.::..|:|.|....:.:.||..|:|.|.|.|||.|...
Zfish   384 LKRKEFLVLLVCGAAFLLGIPNVMQVGIYVFQLMDHYTAIVSIMFLAFFEVVGVCWCYGVKRLSS 448

  Fly   456 DIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQ 520
            ::..|.|.....::|:||..|.|.|:|.:|::.::......|:...||..|...|..:|...:|.
Zfish   449 NLVEMTGKRPSIFFRICWWVICPALITVILVFSVIQFKPARYEDYVYPPWAQGVGWLIALASIIW 513

  Fly   521 LPGWAIYAIYKKRGHNGSFWQRIRAACKP 549
            :|..|::.::..   .|||.::.:.:..|
Zfish   514 IPLAAVHTLWVL---PGSFTEKFKKSITP 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 177/478 (37%)
si:ch211-283g2.1XP_017211707.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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