DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a8

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001314797.1 Gene:slc6a8 / 567544 ZFINID:ZDB-GENE-071024-2 Length:652 Species:Danio rerio


Alignment Length:584 Identity:216/584 - (36%)
Similarity:326/584 - (55%) Gaps:45/584 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRP 70
            :.||.|...|:  |.|...::|:.||:..:|||||:|||||:.::||||.|:|||::.:.:.|.|
Zfish    54 VEKKREGYPER--ETWTRQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYVLFIFLGGIP 116

  Fly    71 VYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPW 135
            :::|||:||||...|.:..:::|||.||:....::......|||..::|....:::.||.:.|||
Zfish   117 IFFLEIALGQFMKAGSINVWNIAPLFKGLGYASMVIVFFCNTYYIMVLAWGFYYFIKSFNATLPW 181

  Fly   136 SRCWESWGT----------DCHDGNAQNSS-GKM---------SPAQLYFEREILHEVPNIDNGL 180
            |.|...|.|          ||.:|...||: |.:         ||...::|.::|    ||.:||
Zfish   182 STCDNPWNTENCIEIFRQGDCKNGTIGNSTFGNLTCEELANGRSPIIEFWENKVL----NISDGL 242

  Fly   181 SLP---NWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGII 242
            ..|   ||:|:.||...|:::...:.:|:||:||..||...||||||:|||:|.||||||.|||:
Zfish   243 DEPGAVNWELMLCLLAVWVMVYFCVWKGVKSTGKIVYFTATFPYVVLIILLVRGVTLPGAYDGIL 307

  Fly   243 YFFKPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIA 307
            |:.||.|.:|....||..|.||:|||.||..|.|....|||.||.:.|.|..::..::|.:|..|
Zfish   308 YYVKPDWSKLGEAQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFVLALINSGTSFFA 372

  Fly   308 GCITFGILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGS- 371
            |.:.|.|||.:|.|.| .||..|.:.|.|||||:||:|::.....| ::|.|||:||.:||:.| 
Zfish   373 GFVVFSILGFMASEQG-VDISKVAESGPGLAFIAYPKAVSMMPVAP-VWAALFFIMLLLLGLDSQ 435

  Fly   372 ---TVGMGSCILRVIRDQFGLRSPPIWKLASGL-TVLGFSVSIVYMTPGGQFILNLVDFYGVS-F 431
               ..|..:.||.:...::.:|...  ::|..: .:|.|.:.:..:|.||.::..|.|:|..| .
Zfish   436 FVGVEGFVTGILDLFPGKYYMRYQR--EIAVAICCLLCFIIDLSMVTQGGMYVFQLFDYYSASGM 498

  Fly   432 TALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALE 496
            |.|..|..|.|.|||:||.:||.:||..|:|.....:.:.||..|||.:...:.::.||:...|.
Zfish   499 TLLWQAFWECVVVAWVYGADRFMDDIARMIGYRPFPWMKWCWSIITPCVCMGIFLFHLLNYKPLT 563

  Fly   497 YKGV-GYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPANVQ 559
            |..| .||....|.|..||...::.:|   :..:||..|..|:|.:|.....||  .||..:::
Zfish   564 YNNVYVYPWWGEVIGWCLALSSMLCIP---VSLVYKLSGAKGTFKERWENLTKP--VWGAHHLE 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 190/498 (38%)
slc6a8NP_001314797.1 SLC6sbd_CT1 64..652 CDD:271397 212/574 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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