DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a9

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_005163551.1 Gene:slc6a9 / 494490 ZFINID:ZDB-GENE-050105-3 Length:653 Species:Danio rerio


Alignment Length:571 Identity:199/571 - (34%)
Similarity:325/571 - (56%) Gaps:51/571 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTGRG 85
            |||.:||:.:.:..:|||||:|||||:.::||||.|:.||.|.|:..|.|:::||:|.||||..|
Zfish    34 WGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFTSLG 98

  Fly    86 VVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGT-DC--- 146
            .:..:.::|:.|||..|.::.:.....||:.::.:...::..|..:.|||:.|...|.| ||   
Zfish    99 CLGVWKVSPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFMSMTNLLPWTYCNNPWNTPDCSGV 163

  Fly   147 ---HDGNAQ---------------NSSGKMSPAQLYFEREILHEVPNIDNGLS------LPNWQL 187
               |..||.               |.:.:.||::.|:...:|    ||.:|:.      ||   :
Zfish   164 VSTHRANATFANMSAVVSGVTEIVNRTKRTSPSEEYWRNYVL----NISDGIGNFGEVRLP---I 221

  Fly   188 VACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWREL 252
            :.|||::|.|:...||||:|||||..||...||||||.||.:|.:||.|||.||.|:..|||:::
Zfish   222 LGCLAVSWFVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFIRGITLDGAISGIKYYLTPQWQKI 286

  Fly   253 LNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGN 317
            |:..||..|.:|:|:||...:|.|||.||||.|:.|.:.|.:||:..:..:|:.||.:.|.|||.
Zfish   287 LDAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCFRDSIIISVTNCGTSVYAGFVIFSILGF 351

  Fly   318 LARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRV 382
            :|...| .|:..|...|.||||::||||:......| ::::|||.||.:||:|:...:...::..
Zfish   352 MAHHLG-VDVSEVADHGPGLAFVAYPEALTLLPISP-LWSLLFFFMLILLGLGTQFCLLETLVTA 414

  Fly   383 IRDQFGLRSPPIWKLAS------GLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGEL 441
            :.|:.|..    |.:.:      |:.::||.:.:...|..|.:.|.|:|.|..||:.:|::....
Zfish   415 VVDEIGTD----WIIKNKTYVTLGVAIIGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC 475

  Fly   442 VAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLA 506
            :.:.::||...:.:|::.|:|.....::|:|||:::|.::|.:||:.::....:.|....||..:
Zfish   476 ICIMYVYGHKNYFKDVEMMLGFPPPIFFRICWRYVSPFIITFILIFTVIQYKPITYNDYVYPGWS 540

  Fly   507 HVFGCFLATLGLIQLPGWAIYAIYKKRGHNGS-FWQRIRAACKPSDTWGPA 556
            .|.|..:|...:|.:|   |||::|.....|| |.:|::.:.||...||||
Zfish   541 LVIGFAMALSSVICIP---IYALFKIAMSEGSTFLERLKNSVKPDPDWGPA 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 177/501 (35%)
slc6a9XP_005163551.1 SLC6sbd_GlyT1 15..598 CDD:212067 199/571 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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