DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a16

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001311464.1 Gene:Slc6a16 / 381884 MGIID:2685930 Length:742 Species:Mus musculus


Alignment Length:628 Identity:150/628 - (23%)
Similarity:271/628 - (43%) Gaps:123/628 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQLE------ISKKSEKPAE--KPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFV 57
            :|.||      :::.|.:.:|  .|.:.|.:.:|::.:.:|..:....:.||.......|..:|.
Mouse   100 VTTLEQESSELVNRMSRESSEGYPPRQLWASKVEYMLAIMSYLLMPSGVLRFASGWVHKGSCSFF 164

  Fly    58 IPYLIALLVIGRPVYYLEISLGQFTGRGVVKAFDM----APLLKGVALGQVLATAASITYYSSIM 118
            |.|::.||.||.|:.:||:::||   |....:.||    :|...||....|:....:.||.:...
Mouse   165 IAYILMLLGIGIPLLFLEMAVGQ---RAQQSSADMWKNLSPWFGGVGYSMVMVCFITNTYLNVFN 226

  Fly   119 ALTLRFWLASFGSELPWSRCWESWGTDCHDGNAQNSSGKMSP------AQLYF-EREILHEVPNI 176
            :..|.:....|...:||.:|           ..|.:|....|      :..|| .|:.|.....|
Mouse   227 SWILFYMSHIFYFVVPWDQC-----------PLQRNSSNFDPECEQATSYTYFWYRKTLKASDRI 280

  Fly   177 DNGLSLPNWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGI 241
            ::| ..|::.|...|.:::.:|...|:.||||.||..:.|.:.||.:::..|:|.:::.||..|:
Mouse   281 EDG-GQPSFSLGMSLFLSFCLICAFLVNGIKSIGKVLFVLLLVPYSIIVCFLIRTLSMDGAEYGL 344

  Fly   242 IYFFKPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYAS----YNN-----FNRNVYNDIVIIT 297
            .:....:...:.:..:|..|..||.|.:.:.||.:::.||    :||     |...::..|.::.
Mouse   345 KHLLILKVASISDLTIWCHAGIQVLFDIGLGFGPIVSLASHVPDFNNCMADAFLMALFKIITLLM 409

  Fly   298 TMDSCSSIIA--------GC-----------ITFGILGNLARE---TGNPD-------------- 326
            |.....||:.        .|           :..|||...|:.   :|||.              
Mouse   410 TTPFLLSILGFWATTTTHHCCKKNQETLLRLVAQGILPPDAQPPDLSGNPTSNYNSWLSSLPPPL 474

  Fly   327 ---IGSVV------------KGGAGLAFISYPEAIAKFEYVP--QMFAVLFFLMLFVLGIGSTV- 373
               :.|||            |......|:.:.|.|:   .:|  ..:.|||||:|..||:.|.: 
Mouse   475 RSAVLSVVPECSVQKQFLKIKDNPRFLFLIFTEVIS---LLPGSGFWIVLFFLLLLTLGLCSNLM 536

  Fly   374 -GMGSCILRVIRDQFGL--RSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALI 435
             .:|:.:  .::|.|..  |.|.:  |...:::..|...::::.|.|.:..:|:....|:...:|
Mouse   537 FMLGNVL--TLQDTFPFCRRQPRL--LIVCVSMAMFLCGLIFIQPSGIYYFSLLSECWVAVPVII 597

  Fly   436 LAIGELVAVAWIYGVNRFCEDIKFMMG--IETGWYWRLCWRFITP----GLMTAV--------LI 486
            :.|.|.:||||.||.:||..|:..::|  |.:|..|  .|.:|:|    ||:|:|        |:
Mouse   598 IIICENLAVAWAYGADRFLADMVALLGRPIFSGCGW--LWCYISPMVVLGLLTSVFVYLVKGPLV 660

  Fly   487 YMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAI 529
            |...|.|..:.....:|..:.:....|....|:.:|.:.:|.:
Mouse   661 YFAWDSSTSKEVVRVFPEWSKILIAGLTVFVLMPIPAYFVYCL 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 137/560 (24%)
Slc6a16NP_001311464.1 SLC5-6-like_sbd 125..694 CDD:294310 142/592 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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