DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and CG8850

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_725122.2 Gene:CG8850 / 36331 FlyBaseID:FBgn0033708 Length:629 Species:Drosophila melanogaster


Alignment Length:563 Identity:319/563 - (56%)
Similarity:422/563 - (74%) Gaps:10/563 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QLEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVI 67
            :|.|:.::|..:....:||..|:|||||||:|||||||:||||:||.:||||.|:|||:|.||:|
  Fly    42 ELTINCEAESESSGQRDQWSRGVEFLFSCIALSVGLGNVWRFPFIALENGGGAFLIPYVIVLLLI 106

  Fly    68 GRPVYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSE 132
            ||||||||:.:|||:.||.::||||||:::|:|.|||.:||.:.|||:.|||||:|:.:|||...
  Fly   107 GRPVYYLEVIIGQFSSRGCIRAFDMAPIMRGIAYGQVYSTALATTYYACIMALTIRYLVASFSEV 171

  Fly   133 LPWSRCWESWGTDC--HDGNAQNSSG---KMSPAQLYFEREILHEVPNI-DNGLSLPNWQLVACL 191
            |||:.|...||..|  ....|.|.|.   .:|.|:|:|.:.:|.|..:: ||||..|:|.||.||
  Fly   172 LPWTYCLVEWGKSCVATGATAANDSSIVQGVSSAELFFTQTVLREPESLDDNGLGTPSWDLVLCL 236

  Fly   192 AIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPL 256
            ...|::||.:|.:||:|||||:|||.:||||::::||:||||||||..||:||.||||.:||||.
  Fly   237 LATWVIIGTILSKGIRSSGKASYFLALFPYVIMIVLLIRAVTLPGAWQGIVYFLKPQWSQLLNPH 301

  Fly   257 VWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARE 321
            |||||:||:|||||||||||:.|||:|:||:||:.|::||||:||.:||:||||.||||||||.|
  Fly   302 VWYAAITQMFFSLAICFGTLVMYASFNDFNKNVHKDVIIITTIDSLTSILAGCIIFGILGNLAFE 366

  Fly   322 TGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQ 386
            |...||..||||||||||||||||||||:|:||:||||||.||.||||||.:||.|.::.|::|:
  Fly   367 TNTKDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGIGSNIGMASAVVNVVKDR 431

  Fly   387 FGLRSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVN 451
            |  ...|.|.||...:::||...:|||||||||:||||||||.:|.||:|||.||:||.|||||.
  Fly   432 F--THLPHWLLAVSASIIGFLCGLVYMTPGGQFVLNLVDFYGCTFIALVLAIAELLAVGWIYGVK 494

  Fly   452 RFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATL 516
            |.|.||:||:.::|.:|||:||..:.||||..||:|||.....|.|:||.||.:.::.|..:..|
  Fly   495 RICSDIEFMLNVKTSFYWRICWAIVAPGLMFLVLVYMLFSYEPLTYRGVQYPPVYYMAGWIIWGL 559

  Fly   517 GLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPANVQ 559
            |::|||.||:..||::.|.  :|..:...|.:|:..|||...|
  Fly   560 GVLQLPFWALVTIYQQPGK--TFGSKFGLAMQPTANWGPLQTQ 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 290/475 (61%)
CG8850NP_725122.2 SLC6sbd 58..532 CDD:271359 290/475 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469620
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D14202at7147
OrthoFinder 1 1.000 - - FOG0008552
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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