DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment List and Slc6a11

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_766478.1 Gene:Slc6a11 / 243616 MGIID:95630 Length:627 Species:Mus musculus


Alignment Length:534 Identity:191/534 - (35%)
Similarity:294/534 - (55%) Gaps:28/534 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTGRG 85
            |.|.:||:.|.....:||||:|||||:.::||||.|:|||::..:..|.||::||.:|||||..|
Mouse    48 WNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEG 112

  Fly    86 VVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLAS-FGSELPWSRCWESWGTD-CH 147
            .:..: .:.||.:|:.....:..|....||..|:|..: |:|:: |.:||||:.|...|.|: |.
Mouse   113 GITCWRRVCPLFEGIGYATQVIEAHLNVYYIIILAWAI-FYLSNCFTTELPWATCGHEWNTEKCV 176

  Fly   148 DGNAQNSS--------GKMSPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIAWLVIGGVLIR 204
            :....|.|        ...||...::||.:|.....|::..:| .|:|..||..||.:....:.:
Mouse   177 EFQKLNFSNYSHVSLQNATSPVMEFWERRVLAISDGIEHIGNL-RWELALCLLAAWTICYFCIWK 240

  Fly   205 GIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFFSL 269
            |.||:||..|....|||::|||||:|.||||||.:||.::..|....|.:|.||..|.||:|||.
Mouse   241 GTKSTGKVVYVTATFPYIMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWVDAGTQIFFSY 305

  Fly   270 AICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGSVVKGG 334
            |||.|.|....||||:|.|.|.|.:::..::|.:|.:||...|.:||.:|.|.|.| |..|.:.|
Mouse   306 AICLGCLTALGSYNNYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQGVP-IAEVAESG 369

  Fly   335 AGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIWK--- 396
            .|||||:||:|:......| ::|.|||:||..||:.|.......::..:.|.:    |.:::   
Mouse   370 PGLAFIAYPKAVTMMPLSP-LWATLFFMMLIFLGLDSQFVCVESLVTAVVDMY----PKVFRRGY 429

  Fly   397 ----LASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVS-FTALILAIGELVAVAWIYGVNRFCED 456
                |...|:::.:.:.:|.:|.||.:|..|.|.|..| ...|.:||.|.|.:.|:||.|||.::
Mouse   430 RRELLILALSIISYFLGLVMLTEGGMYIFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYDN 494

  Fly   457 IKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGV-GYPTLAHVFGCFLATLGLIQ 520
            |:.|:|.......:.||:.:|||:...:.|:.|:....|:|..| .||...:..|..:|...::.
Mouse   495 IEDMIGYRPLSLIKWCWKVVTPGICAGIFIFFLVKYKPLKYNNVYTYPAWGYGIGWLMALSSMLC 559

  Fly   521 LPGWAIYAIYKKRG 534
            :|.|....::|..|
Mouse   560 IPLWIFIKLWKTEG 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 179/486 (37%)
Slc6a11NP_766478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
SLC6sbd_GAT3 44..585 CDD:212077 191/534 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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