DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a2

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:555 Identity:202/555 - (36%)
Similarity:306/555 - (55%) Gaps:19/555 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYL 74
            |:....:|.|.||..::||.|.:..:|.|.|:|||||:.::||||.|:|||.:.|::.|.|::|:
Mouse    48 SQDSDAQPRETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMPLFYM 112

  Fly    75 EISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCW 139
            |::|||:...|....:.:.|..|||....:|.......||:.|:|.:|.:..|||...|||:.|.
Mouse   113 ELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPWTNCG 177

  Fly   140 ESWGT-DCHDGNAQNSS----------GKMSPAQLYFEREI--LHEVPNIDNGLSLPNWQLVACL 191
            .||.: :|.|....|:|          .|.:||..::||.:  |||...| :.:.||.|||:.||
Mouse   178 HSWNSPNCTDPKLLNASVLGDHTKYSKYKFTPAAEFYERGVLHLHESSGI-HDIGLPQWQLLLCL 241

  Fly   192 AIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPL 256
            .:..:|:...|.:|:|:|||..:.....||.||.:||:..||||||.:||..:....:..|....
Mouse   242 MVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGINAYLHIDFYRLKEAT 306

  Fly   257 VWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARE 321
            ||..|.||:||||...||.||.:||||.|:.|.|.|.::.:|::..:|.|:|...|.|||.:|.|
Mouse   307 VWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAHE 371

  Fly   322 TGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQ 386
             ...:|..|...||||.||.|||||:... ....:||||||||..||:.|::|....::..:.|.
Mouse   372 -HKVNIEDVATEGAGLVFILYPEAISTLS-GSTFWAVLFFLMLLALGLDSSMGGMEAVITGLADD 434

  Fly   387 FGLRSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVN 451
            |.:...........:|:..|.:::..:|.||.::|.|:|.:....:.|...:.|.:.|:|.|||:
Mouse   435 FQVLKRHRKLFTCVVTISTFLLALFCITKGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVD 499

  Fly   452 RFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATL 516
            ||..||:.|||.:.|.||||||:|::|..:..|::..:::...|.|....||..|:..|..:|..
Mouse   500 RFSNDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTYDDYTYPPWANWVGWGIALS 564

  Fly   517 GLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSD 551
            .:|.:|.   |.|||.....||.|:|:.....|.:
Mouse   565 SMILVPA---YVIYKFLSIRGSLWERVAYGITPEN 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 182/482 (38%)
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
SLC5-6-like_sbd 56..615 CDD:382020 200/547 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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