DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and F56F4.3

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_491770.3 Gene:F56F4.3 / 186398 WormBaseID:WBGene00018980 Length:701 Species:Caenorhabditis elegans


Alignment Length:648 Identity:138/648 - (21%)
Similarity:230/648 - (35%) Gaps:192/648 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTGRGVVKA 89
            |..|.||::|   |.|...|....|.:||..|.:||.|.|.|:|.|:...|:||.||:...:...
 Worm   112 LSLLLSCVTL---LKNNMVFIECFFNHGGVYFFVPYFIILFVLGVPMAIFELSLAQFSSIPMNGM 173

  Fly    90 FD-MAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGS-------ELPWSRCWESWGTDC 146
            |. |||:|.|:. ..:|......|.|   :|...||.|.::.|       .:.|..|.:..|..|
 Worm   174 FTRMAPMLGGIP-WLILCLRIIYTVY---IAFDPRFLLYAYKSFVTVITGNMNWIHCDDYKGVRC 234

  Fly   147 HDGN------------------------AQNSSGKMS-------------PAQLYFEREILHEVP 174
            .|..                        .|...|.::             |:|:|  :||     
 Worm   235 FDPTWSCKINEFRLNGECVKDVHIRKLAQQQDYGLLTYFGLREYRLISIIPSQIY--KEI----- 292

  Fly   175 NIDNGLSLPNWQLVACLAIAWLVIGGVLIRGIKSSGKAAYF------LGVFPYVVLLILLLRAVT 233
               |||.:.:..|.|.:.:  |:.|.:..:|.:.....|.|      ||:.|.|:|         
 Worm   293 ---NGLDIMDNILAALVFL--LIAGFITYKGHRFFASLAGFFVFLPILGMIPAVIL--------- 343

  Fly   234 LPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVF-------------FSLAICFGTLITYASYNNF 285
                   :.|....:.:...|.::....:|::|             .::.|..|||:...|..:|
 Worm   344 -------VYYDVGSRKKHFFNQILKNNDITKIFELSAWLNAARVTVKTVYIADGTLMALGSRADF 401

  Fly   286 NRNVYNDIVIITTMDSCSSIIAGCITFGILGNL--ARETGNPDIGSVVKGGAGLAFISYPEAIAK 348
            ..|...|.|::....:...::   :.||||..|  |.:...|...:|...|..:.|    .||..
 Worm   402 RHNFIKDAVLLAASGATYRLL---LCFGILPILYVANDILYPFAKTVYARGDLVQF----HAIEL 459

  Fly   349 FEYVPQMFA-------VLFFLMLFVLGIGSTVGMGSCILRVIRDQFGL---------------RS 391
            |......:|       |.||:...:.|   |:.......:||..:..:               :|
 Worm   460 FFSALPSYAIPGISPTVTFFVYAMLYG---TINFAFVAYQVITFEMLINALHHLFPRLLYLKQKS 521

  Fly   392 PPIWKLASGLTVLGF--SVSIVY--MTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNR 452
            ..|..:.:.:|:|.|  .:|:.|  :..|.|..| .:|.|.|...:..:.| :|::|:.:||..|
 Worm   522 VRICIIMATVTLLLFLYILSLPYKQLAVGYQKEL-AIDDYVVGLVSTTVFI-QLISVSIVYGYKR 584

  Fly   453 F--------------------CEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSAL-- 495
            .                    |....::|           |.|..|       |..|:.:.::  
 Worm   585 LLINFLTMLKHHPVTYKLVEKCRVFLYVM-----------WAFFLP-------ISCLVSICSIIV 631

  Fly   496 -EYKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPAN 557
             :|:...:|.:.:   ..::.|.||.|.......|.:|...:|         ...:..|.|||
 Worm   632 KKYQIYHWPLVLY---AAISALPLIYLARKLTMYIMRKEFVSG---------LSQTHRWQPAN 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 124/575 (22%)
F56F4.3NP_491770.3 SLC5-6-like_sbd 73..620 CDD:382020 123/572 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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