Protein Alignment List and snf-12

DIOPT Version :10

• Sequence 1: NP_611364.2
• Gene: List / 37157
• FlyBaseID: FBgn0034381
• Length: 564
• Species: Drosophila melanogaster
• Sequence 2: NP_509527.1
• Gene: snf-12 / 181143
• WormBaseID: WBGene00004911
• Length: 1022
• Species: Caenorhabditis elegans
• Alignment Length: 617
• Identity: 166/617 - (26%)
• Similarity: 289/617 - (46%)
• Gaps: 68/617 - (11%)

  Fly     4 LEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIG 68
            |..||::::     .|.|....:|..||:...||:|:..|||...:|:|||.|.||||.:|:..|
 Worm   148 LRFSKQNDR-----RELWRTQKDFFLSCLGFMVGVGHTMRFPAKVYQHGGGVFFIPYLFSLIFFG 207

  Fly    69 RPVYYLEISLGQFTGRGVVKAFD-MAPLLKGVALGQVLATAASITYYSSIMALTLRFWLAS---- 128
            .|:.:|.:||||:||:....||. :.|:..||....|:.......||:.|:|..:.::..|
 Worm   208 LPLVFLHLSLGQYTGQAANTAFQRLMPIGSGVGWALVVIAIPVAVYYNIIVAWAIHYFFQSAKGL 272

  Fly   129 -FGSELPWSRCWESWGTD---CHDGNAQ---NSSGKMSPAQLYFEREILHEVPNIDNGLSLPNWQ 186
             .|.||||..|.:.|..|   |:..|..   ||:..::..:.:|..|:|......|..|......
 Worm   273 LLGDELPWETCRDEWQLDNRCCNLHNLHSCFNSTNSITAPEAFFHSEVLSLSTFGDFALGPLQSH 337

  Fly   187 LVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRE 251
            ||..||.|||::...:.:|:.|..:........||::|.|||||.::||||..|:.:.|.....:
 Worm   338 LVLSLAAAWLLVFFGVFKGLGSIAQTMNVTATVPYLLLSILLLRGISLPGANKGLTFLFTVDSTK 402

  Fly   252 LLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILG 316
            |....:|.:|..|||:.|.|..|.||:.|:::.:..|:|.|.|::..||:.:|.::|.:.|..:|
 Worm   403 LWKWQIWKSAAEQVFYELGIDAGPLISMAAFSRYRNNIYRDSVLLVIMDALTSCLSGMVIFSFVG 467

  Fly   317 NLARETGNPDIGSVVK-GGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCIL 380
            .:|.|: |.::..|:| ....|:|..|| .:..|.|...::|.|||.||.:..|.:.......|.
 Worm   468 FIASES-NSNVNDVLKHDPLYLSFTVYP-GVTSFMYWGGLWATLFFGMLVLAAIDAEFAWLEMIA 530

  Fly   381 RVIRDQFGLRSPPIW-KLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAV 444
            ....:.|.:::..:. :|.:.|.:.||.:.:.....||.|:.:.::....::.:..||:..:..|
 Worm   531 SAFMNHFSMKNKAVENRLLAFLCLAGFFLGLPLCAQGGIFVFHAIENLNANWNSFSLALLSVAIV 595

  Fly   445 AWIYGVNRFCEDIKFMMGIET--------------------GWYWRLCWRFITPGLMTAVLIYML 489
            .::||::.:..||..|:.:..                    |.|.:....||.|.::|.:|:..:
 Worm   596 CYVYGIDNYLTDISAMLRVPRIQISKATRLKEKLIYFFGPGGIYIKFSLCFICPVILTVLLVASV 660

  Fly   490 LDMSALEYKG----VGYPTLAHVFGCFLATLG-LIQLPGWAIYAIYKKRGH--------NGSFWQ 541
            |....:.:.|    :.|..:|     ::..:| |:.:|..|...|.:.|..        :.|.|:
 Worm   661 LGYQRISFAGRPIPIDYEIVA-----WIVMIGPLLVVPLVAFMQIRQIRNEGKLLKSLFDTSEWR 720

  Fly   542 RIR-AACKPSDTW--------GPANVQLDATI 564
            ..: .:.:|.|.:        .|.|.:...||
 Worm   721 ESQDDSLEPKDLYMRQSGKFESPPNRRRTPTI 752

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
List	NP_611364.2	SLC6sbd	19..489	CDD:271359	145/503 (29%)
snf-12	NP_509527.1	SLC6sbd	158..660	CDD:271359	145/503 (29%)