DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a3

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:563 Identity:205/563 - (36%)
Similarity:313/563 - (55%) Gaps:22/563 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQLEISKKSEKPAE-KPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIAL 64
            :|...:....:.|.| :..|.|...::||.|.|..:|.|.|:|||||:.::||||.|::|||:.:
Mouse    42 LTNSTLINPPQTPVEVQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFM 106

  Fly    65 LVIGRPVYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASF 129
            ::.|.|::|:|::||||...|....:.:.|:||||....:|.:.....:|:.|:|..|.::.:||
Mouse   107 VIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSF 171

  Fly   130 GSELPWSRCWESWGT-DCHDGNAQNSSGKM--------SPAQLYFEREI--LHEVPNIDNGLSLP 183
            ..:|||..|..:|.: :|.|.::.|||..:        :||..||||.:  ||:...||: |..|
Mouse   172 TMDLPWIHCNNTWNSPNCSDAHSSNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDD-LGPP 235

  Fly   184 NWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQ 248
            .|||.|||.:..:::...|.:|:|:|||..:.....|||||..||||.||||||:|||..:....
Mouse   236 RWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAMDGIRAYLSVD 300

  Fly   249 WRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFG 313
            :..|....||..|.|||.|||.:.||.||.::|||.|..|.|.|.:|.|:::|.:|..:|.:.|.
Mouse   301 FYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSGFVVFS 365

  Fly   314 ILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSC 378
            .||.:|::...| |..|...|.||.||.||||||... :...:|.:|||||..|||.|.:|....
Mouse   366 FLGYMAQKHNVP-IRDVATDGPGLIFIIYPEAIATLP-LSSAWAAVFFLMLLTLGIDSAMGGMES 428

  Fly   379 ILRVIRDQFGL--RSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGEL 441
            ::..:.|:|.|  |...::.|  |:.:..|.:|:..:|.||.::..|:|.:....:.|...:.|.
Mouse   429 VITGLVDEFQLLHRHRELFTL--GIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEA 491

  Fly   442 VAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLA 506
            :.|||.|||.:|.:|||.|.|.....||||||:.::|..:..|::..::......|....:|..|
Mouse   492 IGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHYGAYIFPDWA 556

  Fly   507 HVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKP 549
            :..|..:||..:..:|   |||.||.....|||.:::..|..|
Mouse   557 NALGWIIATSSMAMVP---IYATYKFCSLPGSFREKLAYAITP 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 185/482 (38%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 202/545 (37%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 12/31 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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