DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a7

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_446448.2 Gene:Slc6a7 / 117100 RGDID:620928 Length:637 Species:Rattus norvegicus


Alignment Length:550 Identity:209/550 - (38%)
Similarity:318/550 - (57%) Gaps:21/550 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTGRG 85
            |...|:||.|||...|||||:|||||.|:.||||.|::||.:.|.:.|.|:::||:|||||:..|
  Rat    40 WTGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLVPYFLMLAICGIPLFFLELSLGQFSSLG 104

  Fly    86 VVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGTD-C--- 146
            .:..:.::||.||.....:|.......||:.|:|..|.:..||..|.|||..|...|.|: |   
  Rat   105 PLAVWKISPLFKGAGAAMLLIVGLVAIYYNMIIAYVLFYLFASLTSNLPWEHCGNWWNTERCLEH 169

  Fly   147 ---HDGNAQ---NSSGKMSPAQLYFEREILHEVPNIDNGLSLP---NWQLVACLAIAWLVIGGVL 202
               .|||..   |.|..:||::.|:.|.:||...:  .|:..|   .|.|..||.:||:::...:
  Rat   170 RGPKDGNGALPLNLSSTVSPSEEYWSRYVLHIQGS--QGIGRPGEIRWNLCLCLLLAWVIVFLCI 232

  Fly   203 IRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFF 267
            ::|:|||||..||...|||::||:||:|.||||||..||.::..||:..||:..||..|..|:|:
  Rat   233 LKGVKSSGKVVYFTATFPYLILLMLLVRGVTLPGAWKGIQFYLTPQFHHLLSSKVWIEAALQIFY 297

  Fly   268 SLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGSVVK 332
            ||.:.||.|:|:||||.|::|:|.|..|:|..::.:||:||...|.:||.:::|.|.| :..|.|
  Rat   298 SLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAITSILAGFAIFSVLGYMSQELGVP-VDQVAK 361

  Fly   333 GGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIWKL 397
            .|.||||:.||:|:......| .::.|||.||..||:.|.......|:..:.|:|.....|...:
  Rat   362 AGPGLAFVVYPQAMTMLPLSP-FWSFLFFFMLLTLGLDSQFAFLETIVTAVTDEFPYYLRPKKAV 425

  Fly   398 ASGL-TVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFMM 461
            .||| .|..:.:.::..|.||.:.|.|:|.|..||..:::.|...:||..:||:.|||.||..|:
  Rat   426 FSGLICVAMYLMGLILTTDGGMYWLVLLDDYSASFGLMVVVITTCLAVTRVYGIQRFCRDIHMML 490

  Fly   462 GIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWAI 526
            |.:.|.|:|.||.|::|..:.|:|:|.::.....||....:|..|.:.|..:..|..:.:|...:
  Rat   491 GFKPGLYFRACWLFLSPATLLALLVYSIVKYQPSEYGSYRFPAWAELLGILMGLLSCLMIPAGML 555

  Fly   527 YAIYKKRGHNGSFWQRIRAACKPSDTWGPA 556
            .|:.::   .||.|:|::.|.:|:..|||:
  Rat   556 VAVLRE---EGSLWERLQQASRPAIDWGPS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 192/481 (40%)
Slc6a7NP_446448.2 SLC5-6-like_sbd 37..581 CDD:382020 207/547 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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