DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a9

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_006238687.1 Gene:Slc6a9 / 116509 RGDID:621243 Length:638 Species:Rattus norvegicus


Alignment Length:580 Identity:201/580 - (34%)
Similarity:323/580 - (55%) Gaps:41/580 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPV 71
            |:.::|........|||.:||:.:.:..:|||||:|||||:.::||||.|:.||.|.|:..|.|:
  Rat    21 SEATKKDQNLTRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLVFCGIPL 85

  Fly    72 YYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWS 136
            :::|:|.|||..:|.:..:.::|:.|||..|.::.:.....||:.::.:...::.:|....|||:
  Rat    86 FFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWA 150

  Fly   137 RCWESWGT-DC----HDGNAQNSS-----------------GKMSPAQLYFEREILHEVPNI-DN 178
            .|...|.| ||    ...|..|.|                 .:.||::.|:...:|....:| |.
  Rat   151 YCNNPWNTPDCAGVLDASNLTNGSRPTALSGNLSHLFNYTLQRTSPSEEYWRLYVLKLSDDIGDF 215

  Fly   179 G-LSLPNWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGII 242
            | :.||   |:.||.::|:|:...||||:|||||..||...||||||.||.:|.|||.||..||:
  Rat   216 GEVRLP---LLGCLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFTGIM 277

  Fly   243 YFFKPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIA 307
            |:..|:|.::|...||..|.:|:|:||...:|.|||.||||.|:.|.|.|.|||:..:..:|:.|
  Rat   278 YYLTPKWDKILEAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYA 342

  Fly   308 GCITFGILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGST 372
            |.:.|.|||.:|...| .|:..|...|.||||::||||:......| ::::|||.||.:||:|:.
  Rat   343 GFVIFSILGFMANHLG-VDVSRVADHGPGLAFVAYPEALTLLPISP-LWSLLFFFMLILLGLGTQ 405

  Fly   373 VGMGSCILRVIRDQFGLRSPPIWKLAS------GLTVLGFSVSIVYMTPGGQFILNLVDFYGVSF 431
            ..:...::..|.|:.|..    |.|..      |:.|.||.:.|...:..|.:.|.|:|.|..||
  Rat   406 FCLLETLVTAIVDEVGNE----WILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASF 466

  Fly   432 TALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALE 496
            :.::::....|::.:|||...:.:||:.|:|.....::::||||::|.::..:||:.::....:.
  Rat   467 SLVVISCIMCVSIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPTIIFFILIFTVIQYRPIT 531

  Fly   497 YKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPA 556
            |....||..|...|..:|...:|.:|.:|::.:.:..|  .:..||::.|.|||..||||
  Rat   532 YNHYQYPGWAVAIGFLMALSSVICIPLYALFQLCRTDG--DTLLQRLKNATKPSRDWGPA 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 179/499 (36%)
Slc6a9XP_006238687.1 SLC6sbd_GlyT1 16..599 CDD:212067 201/580 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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