DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a20

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_579830.1 Gene:Slc6a20 / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:582 Identity:193/582 - (33%)
Similarity:302/582 - (51%) Gaps:84/582 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVY 72
            :|..:..||...||||.|:|:|:|||.:|||||:|||||:....|||:|::||||.|:|.|.|:.
  Rat    19 EKRARDMEKARPQWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVEGMPLL 83

  Fly    73 YLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWS 136
            |||:::||...:|.:.|: .::|.|.||.:..|:.:.....||:.|.|....:...||...||||
  Rat    84 YLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWS 148

  Fly   137 RCWESWGTDCHDGNAQNSSGKMSPAQLYFEREILHEVPNI-DNGLSLPNWQLVACLAIAWLVIGG 200
            .|..:.....:|...:    |.|..|.::.|:.|:..|:| :||  ...|:...||.:|||::..
  Rat   149 VCPLNSNRTGYDEECE----KASSTQYFWYRKTLNISPSIQENG--GVQWEPALCLTLAWLMVYL 207

  Fly   201 VLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQV 265
            .::||.:|:||..||..:.||.||:|.|:|.:||.||.:|::|.|.|:..:|.||..|..|.||:
  Rat   208 CILRGTESTGKVVYFTALMPYCVLIIYLVRGLTLHGATNGLMYMFTPKIEQLANPKAWINAATQI 272

  Fly   266 FFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLAR---------- 320
            ||||.:.||:||.:||||..:.:.....||::.::|.:||.|..:||.|.|..|.          
  Rat   273 FFSLGLGFGSLIAFASYNEPSNDCQKHAVIVSVINSSTSIFASIVTFSIYGFKATFNYENCLNKV 337

  Fly   321 ----------ETG----------------------------------NPDIGSVVKGGAGLAFIS 341
                      |.|                                  ..::.:.|: |.|||||.
  Rat   338 ILLLTNSFDLEDGFLTASNLEEVKDYLASTYPNKYSEVFPHIRNCSLESELNTAVQ-GTGLAFIV 401

  Fly   342 YPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIWKLASGLT-VLG 405
            |.|||...| |.|:::||:|.||.:||:||.:|..:.||..:.|...:.|....:..|||. ::.
  Rat   402 YAEAIKNME-VSQLWSVLYFFMLLMLGMGSMLGNTAAILTPLTDSKVISSYLPKEAISGLVCLIN 465

  Fly   406 FSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWR 470
            .:|.:|:....|.:..::.:.|..:.:.|::.:.|.:||.::||:.||..|::.|.|....|||:
  Rat   466 CAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLRAMTGRPLNWYWK 530

  Fly   471 LCWRFITPGLMTAVLIYMLLD---MSALEYKG----------VGYPTLAHVFGCFLATLGLI 519
            ..|.|::|.|:..:.|:.|.|   ...|:|:.          ..||..|      ||.:||:
  Rat   531 AMWAFVSPLLIIGLFIFYLSDYILTGTLQYQAWDATQGQLVTKDYPPHA------LAVIGLL 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 179/526 (34%)
Slc6a20NP_579830.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 1/6 (17%)
SLC5-6-like_sbd 26..601 CDD:294310 192/575 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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