DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and Slc6a20a

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:581 Identity:192/581 - (33%)
Similarity:299/581 - (51%) Gaps:96/581 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLG 79
            ||...|||:.|:|:|:|||.:|||||:|||||:....|||:|::||:|.|:|.|.|:.|||:::|
Mouse     2 EKARPQWGHPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVG 66

  Fly    80 QFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRC----- 138
            |...:|.:.|: .::|.|.||.:..|:.:.....||:.|.|....:...||...||||.|     
Mouse    67 QRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWSVCPLNSN 131

  Fly   139 WESWGTDCHDGNAQNSSGKMSPAQLYFEREILHEVPNI-DNGLSLPNWQLVACLAIAWLVIGGVL 202
            ...:..:|.         |.|..|.::.|:.|:..|:| :||  ...|:...||.:|||::...:
Mouse   132 HTGYDEECE---------KASSTQYFWYRKTLNISPSIQENG--GVQWEPALCLTLAWLMVYLCI 185

  Fly   203 IRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFF 267
            :||.:|:||..||....||.||:|.|:|.:||.||.:|::|.|.|:..:|.||..|..|.||:||
Mouse   186 LRGTESTGKVVYFTASMPYCVLIIYLVRGLTLHGATNGLMYMFTPKMEQLANPKAWINAATQIFF 250

  Fly   268 SLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILG---------------- 316
            ||.:.||:||.:||||..:.|.....:|::.::|.:||.|..:||.|.|                
Mouse   251 SLGLGFGSLIAFASYNEPSNNCQKHAIIVSIINSSTSIFASIVTFSIYGFKATFNYENCLNKVIL 315

  Fly   317 ----------------NLARETGN-----------------------PDIGSVVKGGAGLAFISY 342
                            || .|..|                       .::.:.|: |.|||||.|
Mouse   316 LLTNSFDLEDGFLTVSNL-EEVKNYLASTYPNKYSEVFPHIRNCSLESELDTAVQ-GTGLAFIVY 378

  Fly   343 PEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIWKLASGLT-VLGF 406
            .|||...| |.|:::||:|.||.:|||||.:|..:.||..:.|...:.|....:..|||. ::..
Mouse   379 TEAIKNME-VSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKVISSYLPKEAISGLVCLINC 442

  Fly   407 SVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWRL 471
            :|.:|:....|.:..::.:.|..:.:.|::.:.|.:||.::||:.||..|::.|.|....|||::
Mouse   443 AVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLKRFESDLRAMTGRTLSWYWKV 507

  Fly   472 CWRFITPGLMTAVLIYMLLD---MSALEYKG----------VGYPTLAHVFGCFLATLGLI 519
            .|.|::|.|:..:.|:.|.|   ...|:|:.          ..||..|      ||.:||:
Mouse   508 MWAFVSPLLIVGLFIFYLSDYILTGTLQYQAWDATQGQLVTKDYPPHA------LAVIGLL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 179/532 (34%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:294310 192/581 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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