DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a4l

DIOPT Version :10

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_012825214.2 Gene:slc6a4l / 100496361 XenbaseID:XB-GENE-981144 Length:590 Species:Xenopus tropicalis


Alignment Length:564 Identity:199/564 - (35%)
Similarity:308/564 - (54%) Gaps:38/564 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTG 83
            ::|...::||.|.|..:|.|||:||||||.:|||||.|:|||.|..:..|.|::|:|::||||..
 Frog    38 DKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGVPLFYMELALGQFHR 102

  Fly    84 RGVVKAFD-MAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGTDCH 147
            .|.:..:. :.|:.||:.....:.......||::|:|..|.::.:||...|||:.|...|.|.  
 Frog   103 MGAIPIWKRICPIFKGIGFAICIIALYVSFYYNTIIAWALFYFYSSFTETLPWTNCDNPWNTP-- 165

  Fly   148 DGNAQNSSGK---------MSPAQLYFEREIL--HEVPNIDN--GLSLPNWQLVACLAIAWLVIG 199
              |..|..|:         .|||:.::.|::|  ||...:||  ||   .|||:.||.|.:.::.
 Frog   166 --NCTNYFGRSNITWNNYSKSPAEEFYTRKVLGIHEAEGLDNVGGL---RWQLILCLFIIFTIVY 225

  Fly   200 GVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQ 264
            ..|.:|:|:|||..:.....|||||||||:|..|||||..||:::.:|:|.:|::..||..|..|
 Frog   226 FSLWKGVKTSGKVVWVTATLPYVVLLILLIRGATLPGAWRGILFYLRPKWEKLMDTAVWVDAAAQ 290

  Fly   265 VFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGS 329
            :||||...||.|:..:|||.|:.|.|.|.:|.:|::..:|.::|.:.|.:||.:|...| .::..
 Frog   291 IFFSLGPGFGVLLALSSYNPFHNNCYRDALITSTVNCLTSFVSGFVIFTVLGYMAEMRG-VEVED 354

  Fly   330 VVKG-GAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPP 393
            |.|. |..|.||:||||||.. .....||::||||:..||:.||.|....|:..:.|::    |.
 Frog   355 VAKDKGPSLLFITYPEAIANM-VGSTFFAIIFFLMMITLGLDSTFGGLEAIITAVMDEY----PH 414

  Fly   394 IWKLASGLTVLG-----FSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRF 453
            |......|.|||     |:.|:..:|.||.:::.|::.:|.....:.:...|.:||:|.||:.||
 Frog   415 ILSKRRELFVLGLVIVCFTGSLSTLTYGGAYVVKLLEQFGAGCPIIAVVFLEAIAVSWFYGIQRF 479

  Fly   454 CEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGL 518
            ..|:|.|:|...|.:||:||..|:|..:..:::..|:|...|......||......|..:.....
 Frog   480 SNDVKSMLGFVPGIFWRICWVAISPAFLAFIIVSSLMDQPPLILFDYQYPKWTVSVGFLIGASSF 544

  Fly   519 IQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPANVQLDA 562
            |.:|   :|.:||.....||..:|:....:|..|  ..:.|||:
 Frog   545 IWIP---VYMVYKLVWTPGSLKERLAVCVRPEKT--VRDQQLDS 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 180/489 (37%)
slc6a4lXP_012825214.2 SLC5-6-like_sbd 37..573 CDD:444915 194/550 (35%)

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