DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a5

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_031756248.1 Gene:slc6a5 / 100495275 XenbaseID:XB-GENE-993852 Length:789 Species:Xenopus tropicalis


Alignment Length:590 Identity:216/590 - (36%)
Similarity:327/590 - (55%) Gaps:58/590 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLE 75
            |....|....|.:.|:|:.|.:..:|||||:|||||:||:||||.|:||||..|.:.|.|::|:|
 Frog   176 EGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAFKNGGGAFLIPYLTMLALAGLPIFYME 240

  Fly    76 ISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWE 140
            ::||||..:|.:..:...|.|:|..:..::.:.....||:.||..|:.:..||..|.|||:.|..
 Frog   241 VALGQFASQGPISVWKAIPALQGCGIAMLIISVLIAIYYNIIMCYTIFYLFASLVSVLPWASCTN 305

  Fly   141 SWGT-DCHD-----------GNAQN-------------------------SSGKMSPAQLYFERE 168
            .|.| ||.|           |:..|                         :...:|.::.||:..
 Frog   306 PWNTPDCKDKDRLMLDSCIIGSQPNIHIKNSTFCMTAYPNLTLVNFTSHANKSFVSGSEEYFKYN 370

  Fly   169 ILHEVPNIDNGLSLP---NWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLR 230
            :|    .|..|:..|   .|.|..||.:||.::...|.:|||||||..||...||||||:|||:|
 Frog   371 ML----KISAGIEYPGEIRWPLAICLFLAWTIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIR 431

  Fly   231 AVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVI 295
            .||||||.|||.:|..|:|.:|::.:||..|.||:||||:..:|.|||.:|||.|:.|||.|.:|
 Frog   432 GVTLPGAGDGIWWFIMPKWEKLMDAMVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNVYRDTLI 496

  Fly   296 ITTMDSCSSIIAGCITFGILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLF 360
            :|..:|.:||.||.:.|.::|.:|... |.||..|...|.|:||:.||||:.:....| .:|::|
 Frog   497 VTCTNSATSIFAGFVIFSVIGFMAHIL-NVDIEKVADQGPGIAFVVYPEALTRLPLSP-FWAIIF 559

  Fly   361 FLMLFVLGIGSTVGMGSCILRVIRDQF-GLRSP--PIWKL--ASGLTVLGFSVSIVYMTPGGQFI 420
            ||||..||:.:.......|:..:.|:| .|..|  |::.|  .....::||.:    :|.||.::
 Frog   560 FLMLLTLGLDTMFATIETIVTSVSDEFPKLLRPHKPLFTLICCVAFFIMGFPM----ITQGGIYM 620

  Fly   421 LNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVL 485
            |.|||.|..|::.:|:||.|||.::::||:.||||||:.|:|.:...:|::||.|:||.::|.:|
 Frog   621 LQLVDNYAASYSLVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPSRFWKVCWAFVTPTILTFIL 685

  Fly   486 IYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPS 550
            .:.......:.|....|||.:.|.|..:....:|.:|...:..:|..   .|:|.:|::..|.|.
 Frog   686 CFSFYQWEPMTYGSYHYPTWSMVMGWLMLACSVIWIPVMFVIKMYLA---PGTFIERLKLVCSPQ 747

  Fly   551 DTWGP 555
            ..|||
 Frog   748 PDWGP 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 197/514 (38%)
slc6a5XP_031756248.1 SLC6sbd_GlyT2 183..779 CDD:271389 214/583 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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