DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a6

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:570 Identity:193/570 - (33%)
Similarity:311/570 - (54%) Gaps:46/570 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEI 76
            ||.::  |:|.:.::|:.|.....:||||:|||||:.::||||.|:|||.|.|...|.||::||:
 Frog    37 KPPQR--EKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGGGLPVFFLEV 99

  Fly    77 SLGQFTGRGVVKAFD-MAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWE 140
            .|||||..|.:..:: :.|:..|:....::..:....||..|:|..:.:...||..:|||:.|.:
 Frog   100 VLGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGVYYLFQSFQGQLPWALCHQ 164

  Fly   141 SWGTD-CHDGN---------AQNSSGKMSPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIAW 195
            .|.|: |.:..         :.||:...||...::|.::|.....||: :.:..|.|..||.:.|
 Frog   165 PWNTESCVEDTFRKNWTMWMSMNSTNFTSPVTEFWEHKVLSLSKGIDD-VGVLKWDLALCLLLTW 228

  Fly   196 LVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYA 260
            ::....:.:|::|:||..||...||:::||:||:|.||||||.:||.::..|....|.:|.||..
 Frog   229 VICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPGAAEGIKFYLYPDITRLADPQVWID 293

  Fly   261 AVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNP 325
            |.||:|||.|||.|.:.:..|||.:..|.|.|.:::..::|.:|.::|...|.:||.:|:|.| .
 Frog   294 AGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVSGFAIFSVLGFMAQEQG-V 357

  Fly   326 DIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLG-----------IGSTVGMGSCI 379
            ||..|.:.|.|||||:||:|::... :|..:|:|||:||.:||           |.|.|.:....
 Frog   358 DIADVAESGPGLAFIAYPKAVSMMP-LPSFWAILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSF 421

  Fly   380 LR--VIRDQFGLRSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALI-LAIGEL 441
            ||  ..|:.|          .:.:..|.:.:.:..:|.||.::..|.|:|..|...|: :|..|.
 Frog   422 LRKGYRREIF----------IAVVCFLSYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFEC 476

  Fly   442 VAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEY-KGVGYPTL 505
            |||||:||.::|.::|:.|:|.:.|.:.:..|..|||.|..|..|:.|...:.|.| |...||..
 Frog   477 VAVAWVYGADKFYDNIEDMIGYKPGPWMKWSWTVITPLLCVACFIFSLAKYTPLTYNKYYVYPDW 541

  Fly   506 AHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDT--W 553
            |...|..||...:|.:|...::.|.:.   :||..:||:|...|.:.  |
 Frog   542 AIGLGWVLALSSMICIPLVVVFHIVRS---DGSLIERIKAVTAPREVNRW 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 171/494 (35%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 189/558 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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