DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a9

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_004914027.1 Gene:slc6a9 / 100492204 XenbaseID:XB-GENE-948182 Length:638 Species:Xenopus tropicalis


Alignment Length:579 Identity:210/579 - (36%)
Similarity:334/579 - (57%) Gaps:37/579 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGR 69
            |.:||.|.|..   ..|||.:||:.:.:..:|||||:|||||:.::||||.|:.||.|.|:..|.
 Frog    17 EATKKDENPKR---GNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLVFCGI 78

  Fly    70 PVYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELP 134
            |::::|:|.|||..:|.:..:.::|:.|||..|.::.:.....||:.::.:...::.||....||
 Frog    79 PLFFMELSFGQFASQGCLGVWRVSPIFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFASMNRILP 143

  Fly   135 WSRCWESWGTD-CHDGNAQNSSG----------------------KMSPAQLYFEREILHEVPNI 176
            |:.|...|.|: |....:.|||.                      :.||::.|:.|.:|:...:|
 Frog   144 WTYCNNLWNTENCAGVLSPNSSATFNISSQHSLLNLTMGLNQTLKRTSPSEEYWRRHVLNISGDI 208

  Fly   177 -DNG-LSLPNWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAID 239
             |.| :.||   |:.||.::|||:...||||:|||||..||...||||||.||.:|.:||.|||:
 Frog   209 GDFGEVRLP---LLGCLGVSWLVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFIRGITLDGAIN 270

  Fly   240 GIIYFFKPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSS 304
            ||:|:..|||.::|:..||..|.:|:|:||...:|.|||.||||.|:.|.|.|.:||:..:..:|
 Frog   271 GILYYLTPQWDKILHAKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATS 335

  Fly   305 IIAGCITFGILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGI 369
            :.||.:.|.|||.:|...| .|:..|...|.||||::||||:......| ::::|||.||.:||:
 Frog   336 VYAGFVIFSILGFMATHLG-VDVSEVADHGPGLAFVAYPEALTLLPISP-LWSILFFFMLILLGL 398

  Fly   370 GSTVGMGSCILRVIRDQFGLRSPPIWK--LASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFT 432
            |:...:...::..|.|:.|......||  :..|:.::||.:.|...|..|.:.|.|:|.|..||:
 Frog   399 GTQFCLLETLVTAIVDEIGSDWIIRWKTLVTLGVAIIGFLLGIPLTTQAGIYWLLLMDNYAASFS 463

  Fly   433 ALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEY 497
            .:|::....:||.:|||...:.:||:.|:|.....:::.||||.:|.::..:||:.::....::|
 Frog   464 LVIISCIMCIAVMYIYGHRNYFKDIEMMLGFPPPLFFQFCWRFFSPAIIFFILIFTVIQYRPIKY 528

  Fly   498 KGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPA 556
            ....||..|...|..:|...:|.:|.:|::.:::..||  :|.||::.|.|||..||||
 Frog   529 NDYVYPDWALTIGFLMALSSVICIPLYAVFRVWRSEGH--TFLQRLKNAVKPSKDWGPA 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 183/496 (37%)
slc6a9XP_004914027.1 SLC6sbd_GlyT1 11..595 CDD:212067 210/579 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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