DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a8

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002935539.1 Gene:slc6a8 / 100489909 XenbaseID:XB-GENE-986840 Length:644 Species:Xenopus tropicalis


Alignment Length:566 Identity:200/566 - (35%)
Similarity:313/566 - (55%) Gaps:34/566 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTG 83
            :.|.:.::|:.||:..:|||||:|||||:.::||||.|:|||::..::.|.|:::|||:||||..
 Frog    59 DTWTSQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYILIAILGGIPIFFLEIALGQFMK 123

  Fly    84 RGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGT---- 144
            .|.:..:::|||.:|:....|:......|||..|:...:.:.:.||.:.||||.|..:|.:    
 Frog   124 AGSIAVWNIAPLFQGIGFASVVIVFFCNTYYILILTWGVYYLVKSFSAVLPWSHCNNTWNSPDCV 188

  Fly   145 ------DCHDGNAQNSSG---------KMSPAQLYFEREILHEVPNIDNGLSLPNWQLVACLAIA 194
                  ||.:|.|.::.|         |:||...::|:::|.....:|:..|: ||:|:.||...
 Frog   189 DIFRQEDCTNGTANSTFGNLTCNELADKVSPITEFWEKKVLRLSSGLDDIGSI-NWELLLCLIGC 252

  Fly   195 WLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWY 259
            ||::...:.:|:||:||..||...||||||||||:|...||||.:||||:.||.|.:|....||.
 Frog   253 WLLVYFCVWKGVKSTGKIVYFTATFPYVVLLILLVRGAMLPGATEGIIYYLKPDWSKLGTAQVWI 317

  Fly   260 AAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGN 324
            .|.||:|||.||..|.|....|||.||.:.|.|..|:..::|.:|..||.:.|.|||.:|.|.| 
 Frog   318 DAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFILAVINSGTSFFAGFVVFSILGFMANEQG- 381

  Fly   325 PDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGS----TVGMGSCILRVIRD 385
            .||..|.:.|.|||||:||.|::.....| :::.|||.||.:||:.|    ..|:.:.||.::..
 Frog   382 VDISKVAESGPGLAFIAYPRAVSLMPVAP-LWSALFFFMLLLLGLDSQFVGVEGLITAILDLLPA 445

  Fly   386 QFGLRSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVS-FTALILAIGELVAVAWIYG 449
            ::..|......:|....:: |.:.:..:|.||.::..|.|:|..| .|.|.....:.|.|||:||
 Frog   446 RYYFRFQREIAVAICCAIM-FLIDLSMLTEGGMYVFQLFDYYSASGMTLLWQTFWQCVVVAWVYG 509

  Fly   450 VNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEY-KGVGYPTLAHVFGCFL 513
            .:||.:||..|:|.....:.:.||.|:||.:..|:.::.|::...|.| ....||......|...
 Frog   510 ADRFMDDIARMIGYRPFPWMKWCWSFVTPFVCMAIFLFNLINYKPLTYNNSYTYPWWGEAIGWGF 574

  Fly   514 ATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPANVQ 559
            |...::.:|...:|.|...:|.....||.:   .||  .||..:::
 Frog   575 ALSSMLCVPVTFLYKITCAKGSLRERWQHL---TKP--IWGAHHLE 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 183/493 (37%)
slc6a8XP_002935539.1 SLC5-6-like_sbd 58..644 CDD:382020 200/566 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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