DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a3

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002933174.1 Gene:slc6a3 / 100488824 XenbaseID:XB-GENE-982873 Length:621 Species:Xenopus tropicalis


Alignment Length:546 Identity:201/546 - (36%)
Similarity:309/546 - (56%) Gaps:23/546 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQFTG 83
            |.|...::||.|.|..:|.|.|:|||||:.::||||.|::||:..:::.|.|::|:|::||||..
 Frog    61 ETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYIFFMVIAGMPLFYMELALGQFNR 125

  Fly    84 RGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGT-DCH 147
            .|....:.:.|:.|||....:|.:.....:|:.|:|..|::..:||.|||||..|..||.: :|.
 Frog   126 EGAAGVWKICPIFKGVGYTVILISLYVGFFYNVIIAWALQYLFSSFTSELPWIHCNNSWNSPNCS 190

  Fly   148 DGNAQNSSG----------KMSPAQLYFEREI--LHEVPNIDNGLSLPNWQLVACLAIAWLVIGG 200
            :....|.|.          |::||..||||.:  |||...| :.|..|.|:|.:||.:..:.:..
 Frog   191 ETKYSNFSDYSLFGLNDTYKVTPAAEYFERGVLHLHESQGI-HDLGSPRWKLTSCLIVVIVFLYF 254

  Fly   201 VLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQV 265
            .|.:|:|:|||..:.....|||||..||||.||||||||||..:....:..|....||..|.||:
 Frog   255 SLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAIDGIKAYLSVDFLRLCEASVWIDAATQI 319

  Fly   266 FFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETGNPDIGSV 330
            .|||.:.||.||.::|||.|..|.|.|.:|.|:::|.:|..:|.:.|..||.:|::...| ||.|
 Frog   320 CFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSVNSLTSFFSGFVIFSFLGYMAQKHNVP-IGDV 383

  Fly   331 VKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGL--RSPP 393
            .|.|.||.||.||||||... :..:::|:||:||..|||.|.:|....::..:.|:|..  |...
 Frog   384 AKDGPGLIFIIYPEAIATLP-LSSVWSVIFFIMLLTLGIDSAMGGMESVITGLIDEFKFLRRHRE 447

  Fly   394 IWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIK 458
            ::.|.  :.:..|..|:..:|.||.::..|:|.:....:.|...:.|.:.:||.|||.||.:||:
 Frog   448 LFTLF--IVLCTFFTSLSCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGIAWFYGVGRFSDDIE 510

  Fly   459 FMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPG 523
            .|:|...|.||||||:|::|..:..|::..::...:.:|....:|..|:|.|..:|...:..:| 
 Frog   511 EMIGKRPGLYWRLCWKFVSPCFLLFVVVVSIVTYRSPKYGNYTFPEWANVIGWLVAISSMAMVP- 574

  Fly   524 WAIYAIYKKRGHNGSFWQRIRAACKP 549
              :|||||....:|||.::|..|..|
 Frog   575 --LYAIYKFSSLHGSFREKIAYAITP 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 183/484 (38%)
slc6a3XP_002933174.1 SLC6sbd_DAT1 60..615 CDD:212083 201/546 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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