DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a7

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002940131.3 Gene:slc6a7 / 100487063 XenbaseID:XB-GENE-479449 Length:634 Species:Xenopus tropicalis


Alignment Length:569 Identity:214/569 - (37%)
Similarity:327/569 - (57%) Gaps:27/569 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 TQLEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLV 66
            |:|:|    |.|.::  ..|...|:||.|||...|||||:|||||.|:.||||.|:|||.|.|.:
 Frog    27 TELDI----EYPEDR--GNWSGKLDFLLSCIGYCVGLGNVWRFPYRAYTNGGGAFLIPYFIMLAI 85

  Fly    67 IGRPVYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGS 131
            .|.|::::|:|||||:..|.:..:.::||.|||.:|.:|..|....||:.|:|..|.:..||..|
 Frog    86 CGIPLFFMELSLGQFSSLGPLAVWKISPLFKGVGMGMLLIVALVAIYYNMIIAYVLFYLFASLTS 150

  Fly   132 ELPWSRCWESWGTD-CHDGN---AQNS------SGKMSPAQLYFEREILHEVPNIDNGLSLP--- 183
            .|||..|...|.|| |.|.:   |.||      |..:||::.|:.|.:||...:  :|:..|   
 Frog   151 SLPWEHCGNWWNTDLCLDHHVIRASNSALLVNISNTVSPSEEYWSRYVLHIQGS--SGIGDPGQL 213

  Fly   184 NWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQ 248
            .|:|..||.::|.::...:::|:|||||..||...|||::|::||:|.|||.||..||.::..||
 Frog   214 RWKLCLCLLLSWTIVYLCILKGVKSSGKVVYFTATFPYIILVMLLIRGVTLEGAWIGIKFYLTPQ 278

  Fly   249 WRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFG 313
            :..||...||..|..|:|:||.:.||.|:|:||||.|::|:|.|..|:|..::.:||:||...|.
 Frog   279 FEHLLTSKVWIEAALQIFYSLGVGFGGLLTFASYNTFHQNIYRDTFIVTLGNAFTSILAGFAIFS 343

  Fly   314 ILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSC 378
            :||.:::|.|.| :..|.|.|.||||:.||:|:......| .::.|||.||..||:.|.......
 Frog   344 VLGYMSQELGVP-VDQVAKAGPGLAFVVYPQAMTMLPLSP-FWSFLFFFMLLTLGLDSQFAFMET 406

  Fly   379 ILRVIRDQFGLRSPPIWKLASGLTVLG-FSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELV 442
            |:..|.|:|.....|...:.|.:..:. |.:.::..|.||.:.|.|:|.|...|..|::.|...:
 Frog   407 IVTAITDEFPYYLRPKKAVFSAIICVALFLLGLILATDGGMYWLVLLDDYSAGFGLLVIVITFCL 471

  Fly   443 AVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAH 507
            :|:.:||:..||.||:.|:|.:.|.|::.||.|::|..:..:|.|.:|.....:|....:|..:.
 Frog   472 SVSRVYGIKNFCRDIQMMLGFKPGLYFKACWIFLSPVTLMCLLAYSILKYQPSQYGSYKFPLWSE 536

  Fly   508 VFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGPA 556
            ..|..:..|..:.:|...:.||.|:   .||.|:|||.|.:|:..|||:
 Frog   537 ALGILMGLLSCMMIPIGMLVAILKE---EGSLWERIRQASRPAMDWGPS 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 189/483 (39%)
slc6a7XP_002940131.3 SLC5-6-like_sbd 37..581 CDD:382020 207/552 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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