DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a2

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_017948962.2 Gene:slc6a2 / 100486589 XenbaseID:XB-GENE-486549 Length:624 Species:Xenopus tropicalis


Alignment Length:563 Identity:202/563 - (35%)
Similarity:312/563 - (55%) Gaps:23/563 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EISKKSEKPAE--KPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVI 67
            ::|.:.|.|.|  :..||||..::||.|.:..||.|.|:||||::.::||||.|:|||.:.|::.
 Frog    48 DLSPQYEVPGEGQQEREQWGKKIDFLLSVVGFSVDLANVWRFPFLCYKNGGGAFLIPYTLFLIIA 112

  Fly    68 GRPVYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSE 132
            |.|::|:|::|||:...|....:.:.||.|||....:|.......||:.|:|.:|.:.::||.||
 Frog   113 GMPLFYMELALGQYNREGAATVWKICPLFKGVGYTVILIALYVGFYYNVIIAWSLYYLVSSFTSE 177

  Fly   133 LPWSRCWESWGT-DCHDG----------NAQNSSGKMSPAQLYFEREILH-EVPNIDNGLSLPNW 185
            |||.:|...|.: :|.|.          |.:.|..|.:||..::||.:|| ...|..:.|..|.|
 Frog   178 LPWIKCGNEWNSLNCTDPMLLNMSMISYNTKYSKFKTTPAAEFYERGVLHLHESNGIHDLGQPRW 242

  Fly   186 QLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWR 250
            ||..||.:..:|:...|.:|:|:|||..:.....|||||.:||:|.:||||:..||..:.....:
 Frog   243 QLTICLIVVLIVLFFSLWKGVKTSGKVVWITATLPYVVLFVLLIRGITLPGSSKGISAYLHIDIK 307

  Fly   251 ELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGIL 315
            .|.:..||..|.||:|:||...||.||.:||||.|:.|.|.|.::.:|::..:|.|:|...|.||
 Frog   308 RLTDASVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALMTSTINCVTSFISGFAIFSIL 372

  Fly   316 GNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCIL 380
            |.:|.: .|.:|..|...||||.||.|||||:... ....:||:||:||..|||.|.:|....::
 Frog   373 GYMAHK-HNVNIEDVATEGAGLVFIIYPEAISTLA-GSTFWAVVFFIMLLTLGIDSAMGGMEAVI 435

  Fly   381 RVIRDQFGL--RSPPIWKLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVA 443
            ..:.|...:  |...::.|.  :..:.|..:::.:|.||.::|.|:|.:....:.|...:.|.:.
 Frog   436 TGLADDISILKRHRKLFTLL--VAFITFIFALLCITNGGIYVLTLLDTFAAGTSILFAVLIEAIG 498

  Fly   444 VAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGVGYPTLAHV 508
            |:|.|||:||.|||..|:|...|.||||||:|::|..:..|:|..::....|.|....:|..|:.
 Frog   499 VSWFYGVDRFSEDIHRMLGFRPGLYWRLCWKFVSPAFLLFVVIVSIVTYKPLMYDEYKFPPWANR 563

  Fly   509 FGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSD 551
            .|..:|...:..:|   ||.|||.....||..:|:.....|.:
 Frog   564 TGWAIALSSMTLVP---IYIIYKFLTMRGSLRERLAYCITPEN 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 182/483 (38%)
slc6a2XP_017948962.2 SLC5-6-like_sbd 63..622 CDD:382020 198/548 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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