DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a19a.2

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002665492.2 Gene:slc6a19a.2 / 100334171 ZFINID:ZDB-GENE-141210-16 Length:647 Species:Danio rerio


Alignment Length:630 Identity:195/630 - (30%)
Similarity:321/630 - (50%) Gaps:112/630 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTQLEISKKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALL 65
            :.:||:.:..|:|      :|.|..:::.:|:...|||||:|||||:...:|||.|:||:||.|:
Zfish    22 LEKLELQEAGERP------KWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLV 80

  Fly    66 VIGRPVYYLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASF 129
            :.|.|:.:||.::||...||.|..: .:.|.|.||.:..:|.:.....||::|:|..:.::..||
Zfish    81 LEGIPLLHLEFAIGQRLRRGSVGVWRSINPYLLGVGIASMLVSFIVGMYYNTIIAWVMWYFFNSF 145

  Fly   130 GSELPWSRC-----WESWGTDCHDGNAQNSSGKMSPAQLYFEREILHEVPNIDNGLSLPNWQLVA 189
            ...||||:|     ...:.::|.         :.||...::.|:.|:..|:|::...| .|.:|.
Zfish   146 QDPLPWSQCPINGSRTGFVSECE---------RSSPVDYFWYRKTLNTTPHIEDSGGL-QWWMVL 200

  Fly   190 CLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLN 254
            .|..||.|:....||||:::|||.|.....||:||.|.|:|.:||.|::.||.:.|.|...|||:
Zfish   201 SLLCAWTVLWVCCIRGIETTGKAVYITSTLPYLVLTIFLIRGLTLKGSVSGIKFLFTPDVNELLD 265

  Fly   255 PLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLA 319
            |..|..|..|||||.::.||.||.::|||:.:.|...|.|||:.::..:||.|..:.:.|:|..|
Zfish   266 PQTWLDAGAQVFFSFSLAFGGLIAFSSYNSVHNNCEQDAVIISIINGMTSIYAAIVIYSIIGFRA 330

  Fly   320 RE------TGN----------PDIGSVVKG----------------------------------- 333
            .|      .||          |: ||:::|                                   
Zfish   331 TERFDDCLNGNILSLLNAFDLPE-GSIIEGNYTEAIQQLNISRPDIIQELQLKTCDMQTFLSQGV 394

  Fly   334 -GAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPIW-- 395
             |.|||||.:.|||.|....| :::||||:|||.||:.:..|....::..::|...|  |..|  
Zfish   395 EGTGLAFIVFTEAITKMPVSP-LWSVLFFIMLFCLGLSTMFGSIEGVVVPLQDLDIL--PKNWPK 456

  Fly   396 -KLASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKF 459
             ...:.:.|:.|:.:|::....|::.|.|.|.:.||...||:|..|::||:::||::||.:||||
Zfish   457 EAYTALVCVVSFAFAIIFAQGSGEYWLALFDGFAVSIPLLIIAFCEMMAVSYVYGIDRFNDDIKF 521

  Fly   460 MMGIETGWYWRLCWRFITPGLMTAV-LIYMLLDMS------ALEYKGVGYPTL----------AH 507
            |:|.:...:|:..||.|:|.::..: |.|.:..:|      |.:.:...:|||          |.
Zfish   522 MIGHKPNIFWQATWRLISPLIVLVIFLFYFVTTVSKKLTYIAWDPESENFPTLSVLPYPGWISAI 586

  Fly   508 VFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDT 552
            :|  .||.:.::.:|..|:..:.:.|            .||..:|
Zfish   587 IF--ILAGIPVLVIPTVALVRLIRNR------------CCKKEET 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 176/531 (33%)
slc6a19a.2XP_002665492.2 SLC5-6-like_sbd 33..613 CDD:294310 189/613 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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