DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a11b

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_017213744.2 Gene:slc6a11b / 100150472 ZFINID:ZDB-GENE-121116-2 Length:617 Species:Danio rerio


Alignment Length:561 Identity:196/561 - (34%)
Similarity:310/561 - (55%) Gaps:30/561 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KKSEKPAEKPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVY 72
            :.::|.......||.|.:||:.|.....:||||:|||||:.::||||.|.:||:|..:..|.||:
Zfish    29 RSNDKKVVNERGQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVF 93

  Fly    73 YLEISLGQFTGRGVVKAF-DMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWS 136
            :||.:|||||..|.:..: .:.||.:|:.....:..|....||..|:|..:.:....|.:||||:
Zfish    94 FLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWA 158

  Fly   137 RCWESWGTD-CHDGNAQNSSG-----KMSPAQLYFEREILHEVPNID--NGLSLPNWQLVACLAI 193
            .|...|.|: |.|.|.::.:.     ..||...::||.:|.....|:  .||   .|:|..||||
Zfish   159 SCGHYWNTENCVDFNNESIANFTNPYSTSPVMEFWERRVLKISSGIEEVGGL---RWELALCLAI 220

  Fly   194 AWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGIIYFFKPQWRELLNPLVW 258
            ||::....:.:|.||:||..|....|||.:|||||||.:|||||.:||.::..|....|.:|.||
Zfish   221 AWVICYFCIWKGPKSTGKVVYVTATFPYFMLLILLLRGITLPGAANGIKFYLYPDISRLSDPQVW 285

  Fly   259 YAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSSIIAGCITFGILGNLARETG 323
            ..|.||:|||.|||.|.|....|||::|.|.|.|.:::..::|.:|.:||...|.:||.:|.|..
Zfish   286 VDAGTQIFFSYAICLGCLTALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQN 350

  Fly   324 NPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGIGSTVGMGSCILRVIRDQFG 388
            .| |.:|.:.|.|||||:||:|:....:.| ::|.|||:||..||:.|.......::..|.|.: 
Zfish   351 VP-IEAVAESGPGLAFIAYPKAVTMMPWAP-LWAALFFMMLIFLGLDSQFVCVESLVTAIVDMY- 412

  Fly   389 LRSPPIWK-------LASGLTVLGFSVSIVYMTPGGQFILNLVDFYGVS-FTALILAIGELVAVA 445
               |..::       |..|:::..|.:.::.:|.||.::..|.|.|..| ...|.:||.|.:.:.
Zfish   413 ---PKTFRVGYRRELLILGMSIASFFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFESICIG 474

  Fly   446 WIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYMLLDMSALEYKGV-GYPTLAHVF 509
            |:||.:||..:|:.|:|.:..::.:.||:|.|||:.|.:.::.|:....|:|..| .||...:..
Zfish   475 WVYGSDRFYLNIEDMIGYKPIFFIKWCWKFFTPGICTGIFLFFLIKYKPLKYNNVYTYPDWGYGI 539

  Fly   510 GCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPS 550
            |..:|...::.:|...::.|:|.:   |:|.:||:....||
Zfish   540 GWMMAMSSMVCIPLGILFQIWKTK---GTFRERIKKLTTPS 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 178/486 (37%)
slc6a11bXP_017213744.2 SLC5-6-like_sbd 38..576 CDD:320982 193/549 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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