DRSC/TRiP Functional Genomics Resources

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Protein Alignment List and slc6a14.1

DIOPT Version :9

Sequence 1:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster
Sequence 2:XP_002939712.3 Gene:slc6a14.1 / 100127180 XenbaseID:XB-GENE-480827 Length:634 Species:Xenopus tropicalis


Alignment Length:586 Identity:215/586 - (36%)
Similarity:320/586 - (54%) Gaps:64/586 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KPAEQWGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFVIPYLIALLVIGRPVYYLEISLGQ 80
            |....|....::|.|.|..:|||||:|||||:|::||||.|:|||.|.|.:.|.|:::||.|:||
 Frog    30 KERGNWSKKSDYLLSMIGYAVGLGNVWRFPYLAYKNGGGAFLIPYTIMLALAGLPLFFLECSMGQ 94

  Fly    81 FTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTLRFWLASFGSELPWSRCWESWGTD 145
            |:..|.|..:...|:|:||.:..||.|.....||:.|:|.:|.:..|||.:.||||.|: :|..:
 Frog    95 FSSSGPVLVWRAVPILQGVGITMVLVTTFVSIYYNIIIAYSLYYMFASFQTILPWSDCF-AWADE 158

  Fly   146 ---------CHDGNAQN------------------SSGKMS----PAQLYFEREILHEVPNIDNG 179
                     |:...:.|                  :|..|.    |::.|:|:..|    .:..|
 Frog   159 KCSKVTRGFCNVSLSNNTVAYNLTWVKERNLTCIENSIVMEDVDLPSKQYWEKVTL----RLSGG 219

  Fly   180 LSLPN---WQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRAVTLPGAIDGI 241
            |....   |.|..||.:||:::|..|.:|||||||..||..:|||:||:|||:|..||.||.:||
 Frog   220 LDETGEIVWYLALCLLLAWIIVGAALFKGIKSSGKVVYFTAIFPYIVLIILLVRGATLEGAFNGI 284

  Fly   242 IYFF--KPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVIITTMDSCSS 304
            .|:.  |....:|:...||..|.||:||||:..:|.||..:|||.|:.|.|:|.:::...:..:|
 Frog   285 DYYIGTKSNITKLMEAEVWKDAATQIFFSLSTAWGGLIALSSYNKFHNNCYSDAIVVCVTNCLTS 349

  Fly   305 IIAGCITFGILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFFLMLFVLGI 369
            :.||...|.|||::|..|..| :..||..|.|||||:||||:||....| :::.|||.||..||:
 Frog   350 VFAGFAIFSILGHMAFVTDKP-VPEVVDSGFGLAFIAYPEALAKLPISP-LWSFLFFFMLLTLGL 412

  Fly   370 GSTVGMGSCILRVIRDQFGLRSPPIWK-----LASGLTVLGFSVSIVYMTPGGQFILNLVDFYGV 429
            .|...|...|:..|:|.|    |.:.|     :..|..|:.|.:.::.:|..|.:.:||:|::..
 Frog   413 DSQFAMIETIITSIQDAF----PQMMKRMRIPVTIGCCVILFLLGLLCVTQSGIYWVNLIDYFCG 473

  Fly   430 SFTALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGW----YWRLCWRFITPGLMTAVLIYMLL 490
            .:..|..|:.|||.:.||||.|||.:||:.|:| |..|    :||.||..::|.|:||:|::.|:
 Frog   474 GWAILFSAVLELVGINWIYGGNRFIKDIEMMIG-EKHWTFWIWWRACWFVVSPLLLTAILLWSLI 537

  Fly   491 DMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWGP 555
            ...:..|..|.|||.....|..:....||.:|..|:..|.:.:|:       :...||.:..|||
 Frog   538 TFHSPTYGSVVYPTWGTAIGWCMICFCLIWIPIVAVLKIIRAKGN-------VLQTCKAAQNWGP 595

  Fly   556 A 556
            |
 Frog   596 A 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 195/514 (38%)
slc6a14.1XP_002939712.3 SLC6sbd_ATB0 32..628 CDD:271391 214/584 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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