DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15073 and Zfp236

DIOPT Version :10

Sequence 1:NP_611362.2 Gene:CG15073 / 37155 FlyBaseID:FBgn0034379 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001361158.1 Gene:Zfp236 / 329002 MGIID:1926950 Length:1847 Species:Mus musculus


Alignment Length:482 Identity:97/482 - (20%)
Similarity:169/482 - (35%) Gaps:148/482 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 DKVKPLMQRMYEE-KRLQMERGSIGGSYFMVQLPDGTMEKRLKAPLNADPGVHSSLALDQLAAQQ 301
            :|:|.||..:... |.|....    |.:|       |.||.|:...|         :.|.|.::.
Mouse   186 EKLKHLMSLLMNSCKSLNDPH----GEHF-------TAEKLLENLCN---------STDDLLSEG 230

  Fly   302 GGMHPVATLPTISEFKAQEQNGSSGSSSESSQIEMKKPLNKKRNTNSESDAADYGADNMPRNASQ 366
            .    ||...|:|.|....:|     |......::|.|:.|....|:.::.|      :.||.: 
Mouse   231 N----VADGETLSVFLDAVEN-----SMRLIGPQLKDPVTKMETQNTYAEVA------VTRNQT- 279

  Fly   367 PAFTSHQSGMPKNGSVPTFDRVRKHSTGE------------RFKPSLAAIKASSRGDVGSNGDVR 419
                      |.:|||..       |||.            :..|..|.:...|..|:.|:.|:.
Mouse   280 ----------PPSGSVTL-------STGSAHFNTSWETVVGKSYPGFAFVALVSYKDMNSSSDLF 327

  Fly   420 KSMHLRLSRGSADRPAMVRPLSRKDIFY---SGSVTNLKEFQSQKSLTNYRNSVVSLTKFEKEHR 481
            .||    :|..:|       :..|.|.|   |..||.:......|.|    :..|:|....:|.|
Mouse   328 NSM----AREKSD-------VKEKQITYKLNSKVVTAVVSNPDTKHL----SKPVTLIFTHEEKR 377

  Fly   482 NDVR---------DDVEKG----------REEQYDLCPCLALPESFKNAIGAMMDVSLLRDPVFM 527
            .:..         .:.|:|          ....:..|.|     |..::...:|.:..:.| .|.
Mouse   378 AESEGVAYSCVYWSESERGWSGRGCELAWSNSTHTACSC-----SHLSSFAVLMALYPVED-TFE 436

  Fly   528 MIGVSNIFGMAGLYVPFVYLVDAAV-------LDGIEQNSASF----------LISIIGITNTVG 575
            ::.::.:    ||.:..:.|:...:       :.| .:||...          |:.:.||::|..
Mouse   437 LVVITRV----GLVLSLICLILCILTFRFCRSIQG-TRNSIHLHLSVCLFIADLVFLCGISSTHN 496

  Fly   576 RIVCGYVADFPQVDALFLNNICLVI--------STVAVALTPFCHSYAAYVAMAIAFGIAIAGYI 632
            ::.|..||..  :...||:..|.::        ..|.|..|...|.|    ..|:.:|:.:. .:
Mouse   497 QVACAIVAGL--LHFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLY----MYAVGYGVPLV-IV 554

  Fly   633 SLTSIILVDLLGLDK--LTNAFGLLIL 657
            |:::|.:....|.|:  ..:..|.|||
Mouse   555 SISAIAVPKGYGTDRHCWLSLEGYLIL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15073NP_611362.2 zf-AD 2..75 CDD:462262
COG5236 <240..>375 CDD:227561 28/135 (21%)
C2H2 Zn finger 269..286 CDD:275368 5/16 (31%)
C2H2 Zn finger 294..316 CDD:275368 6/21 (29%)
C2H2 Zn finger 325..345 CDD:275368 4/19 (21%)
C2H2 Zn finger 352..370 CDD:275368 3/17 (18%)
C2H2 Zn finger 410..430 CDD:275368 6/19 (32%)
C2H2 Zn finger 437..458 CDD:275368 6/23 (26%)
C2H2 Zn finger 466..486 CDD:275368 4/28 (14%)
C2H2 Zn finger 494..512 CDD:275368 3/17 (18%)
Zfp236NP_001361158.1 COG5048 <30..234 CDD:227381 16/71 (23%)
C2H2 Zn finger 41..61 CDD:275368
C2H2 Zn finger 70..90 CDD:275368
C2H2 Zn finger 97..117 CDD:275368
C2H2 Zn finger 125..145 CDD:275368
C2H2 Zn finger 157..177 CDD:275368
COG5048 197..>550 CDD:227381 85/437 (19%)
C2H2 Zn finger 201..221 CDD:275368 7/30 (23%)
C2H2 Zn finger 229..249 CDD:275368 6/28 (21%)
C2H2 Zn finger 257..278 CDD:275368 6/26 (23%)
C2H2 Zn finger 289..310 CDD:275368 3/20 (15%)
C2H2 Zn finger 486..506 CDD:275368 6/19 (32%)
C2H2 Zn finger 514..534 CDD:275368 3/19 (16%)
C2H2 Zn finger 542..562 CDD:275368 4/20 (20%)
zf-H2C2_2 554..579 CDD:463886 5/24 (21%)
C2H2 Zn finger 570..590 CDD:275368 4/12 (33%)
COG5048 653..1058 CDD:227381
C2H2 Zn finger 661..681 CDD:275368
C2H2 Zn finger 689..709 CDD:275368
C2H2 Zn finger 717..737 CDD:275368
C2H2 Zn finger 745..765 CDD:275368
COG5048 937..1317 CDD:227381
C2H2 Zn finger 972..992 CDD:275368
C2H2 Zn finger 1000..1020 CDD:275368
C2H2 Zn finger 1028..1048 CDD:275368
C2H2 Zn finger 1172..1192 CDD:275368
C2H2 Zn finger 1200..1220 CDD:275368
C2H2 Zn finger 1228..1248 CDD:275368
C2H2 Zn finger 1256..1276 CDD:275370
FhaB <1340..>1616 CDD:442443
SUF4-like 1662..>1710 CDD:411020
C2H2 Zn finger 1662..1683 CDD:411020
C2H2 Zn finger 1662..1683 CDD:275368
C2H2 Zn finger 1691..1711 CDD:275368
C2H2 Zn finger 1691..1710 CDD:411020
C2H2 Zn finger 1727..1747 CDD:275368
zf-H2C2_2 1740..1764 CDD:463886
C2H2 Zn finger 1755..1775 CDD:275368
zf-H2C2_2 1767..1792 CDD:463886
C2H2 Zn finger 1783..1801 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.