DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15073 and row-1

DIOPT Version :9

Sequence 1:NP_611362.2 Gene:CG15073 / 37155 FlyBaseID:FBgn0034379 Length:580 Species:Drosophila melanogaster
Sequence 2:NP_001122473.1 Gene:row-1 / 172928 WormBaseID:WBGene00009508 Length:584 Species:Caenorhabditis elegans


Alignment Length:547 Identity:103/547 - (18%)
Similarity:180/547 - (32%) Gaps:205/547 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 NEQFLTEVIAQQEQQTDSNPPKEQFIKEDNATVNDPETSATLPTEQRRETRSTAKS-------KA 178
            |.|||.::.|:.             :|...::|:  .|.|.:|:...:.||:...:       |.
 Worm    94 NPQFLVQLAAKG-------------LKRPFSSVH--STPAVVPSTSIQRTRNNQNAGNTPNIYKG 143

  Fly   179 HH------SLPPSTPPEKSNS--VANKSKAKRTPCKAEGTPQKSKRYADYKQC--MLDIDAKISA 233
            |:      |..||....:.|:  :..|......|.|.            ||.|  ::::...|.|
 Worm   144 HYMFEATESYEPSRRSSRYNTKKIEGKFMCSYNPTKC------------YKLCGSVVEVINHIWA 196

  Fly   234 HM-----------------------------------------RL-TCDVCHEGQETFLLLCKHM 256
            |:                                         || ||..|:....|..|...|:
 Worm   197 HVIHDPPLPPIEKKESKDDGMFSCLLRNSDAAQLAENSALSLKRLQTCQFCNAVFRTVHLKTIHV 261

  Fly   257 LQEHHRKGYAICCNKKFYKRSFLTDHIDRHADPEKFKCTQCDKRFADKQCLRNHELLKHHPEEEK 321
            ::.|..:                 ||:|.       .|..|:..|.:...|..|  :|.|...|.
 Worm   262 VKCHMEQ-----------------DHLDT-------TCNICELDFGNSIALNTH--MKKHISGEA 300

  Fly   322 TFMCEQCPKR-----YTKQYLLDQHRVIHKERNVVCDLCERRFPNQSLLCTHVKMAHGNYGTMCD 381
            .:.|::|..|     :..|:.:::|.  :..|.::|.:|               :.|.      |
 Worm   301 PYNCQKCKYRTSVRAFFYQHFIEKHS--NDSRTLLCPIC---------------LHHE------D 342

  Fly   382 ICAQVIRGRAAFQR----HQLEHAGVTEPKVQCDICGSWHKNKHSLKKHVRRHNGTAATCDLCGK 442
            :...|.|.:..|.|    |...||  ..|:::|.:|.....::..|:.| |.::.|..       
 Worm   343 LRPNVRRSKHIFVREFVNHMRSHA--LGPQMRCHVCALTFTSRLLLEAH-RTNDHTML------- 397

  Fly   443 VSPNRSAMLSHQRYVHLTDRKH-----ECSVCNKAFKKAITLRE----------------HMTMH 486
               |....:..::.||.|:|:|     :..:..:.|.:.:..|.                .:|. 
 Worm   398 ---NSLWQVIERKSVHETEREHMSKRNKIGLLQRRFFETLEGRRINDEVACAGDKEREGFDLTT- 458

  Fly   487 TGEVLYKCPHCPKTFNSNANQHTHRRKCHPKEFEEARKARTEKRKAIEEETPSVLTISTGEDGES 551
            ||:.|::|....|::|.|... :|..||               |::|.:.......:..|.|.:.
 Worm   459 TGDTLFECECGFKSWNGNRTA-SHYHKC---------------RRSINDIERKREIVRLGSDPKE 507

  Fly   552 HSILL------TNTEEDIKGDTIEFTL 572
            ...|.      ||||    .:|.|.||
 Worm   508 ELELFAVYPQPTNTE----AETEEATL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15073NP_611362.2 zf-AD 2..78 CDD:285071
C2H2 Zn finger 269..286 CDD:275368 3/16 (19%)
C2H2 Zn finger 294..316 CDD:275368 6/21 (29%)
C2H2 Zn finger 325..345 CDD:275368 5/24 (21%)
C2H2 Zn finger 352..370 CDD:275368 2/17 (12%)
C2H2 Zn finger 410..430 CDD:275368 5/19 (26%)
C2H2 Zn finger 437..458 CDD:275368 1/20 (5%)
C2H2 Zn finger 466..486 CDD:275368 3/35 (9%)
C2H2 Zn finger 494..512 CDD:275368 5/17 (29%)
row-1NP_001122473.1 GAT1 <15..288 CDD:227928 42/244 (17%)
C2H2 Zn finger 244..265 CDD:275368 5/20 (25%)
C2H2 Zn finger 275..295 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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