DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and CIPK18

DIOPT Version :10

Sequence 1:NP_611361.4 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_174217.1 Gene:CIPK18 / 839797 AraportID:AT1G29230 Length:520 Species:Arabidopsis thaliana


Alignment Length:355 Identity:136/355 - (38%)
Similarity:197/355 - (55%) Gaps:29/355 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TPQNYKVPSTSKISVDKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYL 82
            :||:.:.|.:.:.::    .:|.|||.|.:|.|.||.|.||.||.:..|||||:|||..:.:..|
plant    55 SPQSPRSPRSPRNNI----LMGKYELGKLLGHGTFAKVYLAQNIKSGDKVAIKVIDKEKIMKSGL 115

  Fly    83 NKTF-REIAILKSLRHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQ 146
            .... |||:||:.:|||:|..|:|||.::|.||.|.||...||:| :.||.||:.|..|.|.|.|
plant   116 VAHIKREISILRRVRHPYIVHLFEVMATKSKIYFVMEYVGGGELF-NTVAKGRLPEETARRYFQQ 179

  Fly   147 LVSAVHYCHRRGVVHRDLKAENVLLDKDMNIKLADFGFS---NHYEEGATLKTWCGSPPYAAPEV 208
            |:|:|.:||.|||.|||||.||:|||...|:|::|||.|   ....:.....|:||:|.|.||||
plant   180 LISSVSFCHGRGVYHRDLKPENLLLDNKGNLKVSDFGLSAVAEQLRQDGLCHTFCGTPAYIAPEV 244

  Fly   209 FQGLEYDGPKSDIWSLGVVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNML 273
            .....||..|:|:||.||:|:.|:.|.:||..|.|:.:..::..|:||.|.:.|.:..:|:..:|
plant   245 LTRKGYDAAKADVWSCGVILFVLMAGHIPFYDKNIMVMYKKIYKGEFRCPRWFSSDLVRLLTRLL 309

  Fly   274 VVEPDRRYTIKQIIKHRWLSEWQS-------------EMQEQERFGDMSPGSGTVSKSAS---TS 322
            ...||.|.||.:|:|:||..:...             |.:::|.....|..|.|||:|.:   ..
plant   310 DTNPDTRITIPEIMKNRWFKKGFKHVKFYIEDDKLCREDEDEEEEASSSGRSSTVSESDAEFDVK 374

  Fly   323 SLGSASDSPPQ----LDSVVMTHMLQLPGL 348
            .:|..|...|.    .|.:..:....|.||
plant   375 RMGIGSMPRPSSLNAFDIISFSSGFDLSGL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_611361.4 Protein Kinases, catalytic domain 40..292 CDD:473864 116/255 (45%)
UBA_SIK 335..380 CDD:270523 4/14 (29%)
CIPK18NP_174217.1 Protein Kinases, catalytic domain 73..327 CDD:473864 115/254 (45%)
CIPK_C 388..499 CDD:213380 4/17 (24%)

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