DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and CIPK12

DIOPT Version :10

Sequence 1:NP_611361.4 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_193605.1 Gene:CIPK12 / 827604 AraportID:AT4G18700 Length:489 Species:Arabidopsis thaliana


Alignment Length:533 Identity:162/533 - (30%)
Similarity:247/533 - (46%) Gaps:98/533 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PPTSSTPQNYKVPSTSKISVDKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDK-TC 76
            |...|:||              .|.:|.||:.|.:|.|.||.|.||.|:.|...||||:||| ..
plant    12 PKERSSPQ--------------ALILGRYEMGKLLGHGTFAKVYLARNVKTNESVAIKVIDKEKV 62

  Fly    77 LNEEYLNKTFREIAILKSLRHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAA 141
            |....:....|||:||:.:|||:|.:|:|||.:::.||.|.||...||:|:. ||.||:||..|.
plant    63 LKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNK-VAKGRLKEEVAR 126

  Fly   142 RVFTQLVSAVHYCHRRGVVHRDLKAENVLLDKDMNIKLADFGF---SNHYEEGATLKTWCGSPPY 203
            :.|.||:|||.:||.|||.|||||.||:|||::.|:|::|||.   |:...:.....|:||:|.|
plant   127 KYFQQLISAVTFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAY 191

  Fly   204 AAPEVFQGLEYDGPKSDIWSLGVVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQL 268
            .||||.....||..|.||||.||:|:.|:.|.|||..:.::.:..::..|:||.|.:.|.|..:|
plant   192 VAPEVLARKGYDAAKVDIWSCGVILFVLMAGYLPFHDRNVMAMYKKIYRGEFRCPRWFSTELTRL 256

  Fly   269 IRNMLVVEPDRRYTIKQIIKHRWLSEWQSEMQ---EQERFGDMSPGSGTVSKSASTSSLGSASDS 330
            :..:|...|::|:|..:|:::.|..:....::   |.::..::.......|.|..:....:||:|
plant   257 LSKLLETNPEKRFTFPEIMENSWFKKGFKHIKFYVEDDKLCNVVDDDELESDSVESDRDSAASES 321

  Fly   331 ----------------PPQL---DSVVMTHMLQLPGLTADMIAQSVHEQRFDNIYAIYNLLHDKL 376
                            |..|   |.:..:....|.||..|    .....||.:...:..::    
plant   322 EIEYLEPRRRVGGLPRPASLNAFDIISFSQGFDLSGLFDD----DGEGSRFVSGAPVSKII---- 378

  Fly   377 QQRRRENQRLQHHASLAYSRSRKTSITTGVVDRSEPVKQESLDRLSPLSNANASSSALGFGWSDV 441
                   .:|:..|.:.....||......:....:.||       .||:.|   :.......|.|
plant   379 -------SKLEEIAKVVSFTVRKKDCRVSLEGSRQGVK-------GPLTIA---AEIFELTPSLV 426

  Fly   442 AVDLEKYG----DFELECLARSNDPPVNAQHLSAHAGGGVNGANTRRHTVGPGDVAHE------- 495
            .|:::|.|    ::|..|   :|:.....|:|:|                  .||..|       
plant   427 VVEVKKKGGDKTEYEDFC---NNELKPKLQNLTA------------------DDVVAEPVAVSAV 470

  Fly   496 QALANPNVPPIDF 508
            ...|.||.|.|.|
plant   471 DETAIPNSPTISF 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_611361.4 Protein Kinases, catalytic domain 40..292 CDD:473864 111/255 (44%)
UBA_SIK 335..380 CDD:270523 7/44 (16%)
CIPK12NP_193605.1 STKc_SnRK3 25..279 CDD:271133 111/254 (44%)
CIPK_C 342..453 CDD:213380 24/138 (17%)

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