DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and CIPK1

DIOPT Version :10

Sequence 1:NP_611361.4 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_566580.1 Gene:CIPK1 / 821016 AraportID:AT3G17510 Length:444 Species:Arabidopsis thaliana


Alignment Length:454 Identity:154/454 - (33%)
Similarity:225/454 - (49%) Gaps:70/454 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTF---REIAILKS 94
            :|.:|:|.|||.:|:|:|||..||.|.:.|:....|:|||||:.:.:  ||.:.   |||..||.
plant    12 EKGMRLGKYELGRTLGEGNFGKVKFAKDTVSGHSFAVKIIDKSRIAD--LNFSLQIKREIRTLKM 74

  Fly    95 LRHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGV 159
            |:||||.||:||:.|::.|.:|.|....||:||.:|:||::.|.:..::|.||:..:.|||.:||
plant    75 LKHPHIVRLHEVLASKTKINMVMELVTGGELFDRIVSNGKLTETDGRKMFQQLIDGISYCHSKGV 139

  Fly   160 VHRDLKAENVLLDKDMNIKLADFGFS---NHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDI 221
            .|||||.||||||...:||:.|||.|   .|:.:...|.|.||||.|.||||.....|||..|||
plant   140 FHRDLKLENVLLDAKGHIKITDFGLSALPQHFRDDGLLHTTCGSPNYVAPEVLANRGYDGAASDI 204

  Fly   222 WSLGVVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQI 286
            ||.||:||.::.|.||||.:.:..|..::..|...||.::|.....:|:.||...|..|.|:..|
plant   205 WSCGVILYVILTGCLPFDDRNLAVLYQKICKGDPPIPRWLSPGARTMIKRMLDPNPVTRITVVGI 269

  Fly   287 IKHRWLS-EWQSEMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGLTA 350
            ....|.. |:...:.:.:...::.......|.....|..|..||||..:::..:..|.....|:.
plant   270 KASEWFKLEYIPSIPDDDDEEEVDTDDDAFSIQELGSEEGKGSDSPTIINAFQLIGMSSFLDLSG 334

  Fly   351 DMIAQSVHEQ--RFDNIYAIYNLL-----------------HDKLQQRRRE-NQRLQHHASLAYS 395
            ....::|.|:  ||.:..:..:||                 |.||:.::.| ||:.|  ..|   
plant   335 FFEQENVSERRIRFTSNSSAKDLLEKIETAVTEMGFSVQKKHAKLRVKQEERNQKGQ--VGL--- 394

  Fly   396 RSRKTSITTGVVDRSEPVKQESLDRLSPLSNANASSSALGFGWSDVAVDLEK-YGDFELECLAR 458
                 |:|..|.:            :.|..|               .|:|.| |||   .||.|
plant   395 -----SVTAEVFE------------IKPSLN---------------VVELRKSYGD---SCLYR 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_611361.4 Protein Kinases, catalytic domain 40..292 CDD:473864 112/257 (44%)
UBA_SIK 335..380 CDD:270523 11/63 (17%)
CIPK1NP_566580.1 STKc_SnRK3 19..274 CDD:271133 112/256 (44%)
CIPK_C 319..432 CDD:213380 30/145 (21%)

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