DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and Smok3c

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:NP_001297632.1 Gene:Smok3c / 622486 MGIID:3647925 Length:504 Species:Mus musculus


Alignment Length:403 Identity:127/403 - (31%)
Similarity:205/403 - (50%) Gaps:47/403 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKT---CLNEEYLNKTFREIAILKSLRHPHITR 102
            |.:.:|||.|..|.||||.:.:|.|.||:|.|.|.   |:      ....|:.:|....||::..
Mouse    28 YVMLETIGHGGCATVKLAQHRLTGTHVAVKTIQKRGYWCI------LIMSEVDLLMMADHPNVIS 86

  Fly   103 LYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVVHRDLKAE 167
            |.:|:|::..:||:.|......::.|:...|.::|.||..:|.||:||::|||.:|:||||||.:
Mouse    87 LLQVIETKKKVYLIMELCEGKSLYQHIRKAGYLQEHEARALFKQLLSAMNYCHNQGIVHRDLKPD 151

  Fly   168 NVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLGVVLYALV 232
            |::::||..:|:.|||.|...:.|..|..:||:.|::||||.....|||||.|:|:||||||.:|
Mouse   152 NIMVEKDGKVKIIDFGLSTKVKPGQKLNLFCGTYPFSAPEVLLSTPYDGPKIDVWTLGVVLYFMV 216

  Fly   233 CGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQIIKHRWLSEWQS 297
            .|.:|||..:|..|..|::.||:.||..:|.|...|:..::...|..|.|:.:::.|.|::|   
Mouse   217 TGKIPFDACSIKRLVKRILAGKYSIPSRLSAELRDLLSLLMTANPKLRPTVAEVMVHPWVTE--- 278

  Fly   298 EMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGLTADMIAQSVHEQRF 362
                         |||.......       ..:|.:.|..::..|..: |..|..|..|:.:::|
Mouse   279 -------------GSGVFPDPCE-------EQTPLKPDPAIVKAMGHI-GFQAQDIEDSLRQRKF 322

  Fly   363 DNIYAIYNLLHDKLQQRRRENQRLQHHASLAYSRSRKTSIT--TGVVDRSEP---VKQESLDRLS 422
            :...|.|.||         :.|.|:.......:|....|:|  ..:||.:..   :::...:...
Mouse   323 NQTMASYCLL---------KKQILKECDRPTRARPVNPSVTPFPSLVDTATTCLGLRRRENEPTC 378

  Fly   423 PLSNANASSSALG 435
            |.|:||...|..|
Mouse   379 PWSSANRQVSVCG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 97/253 (38%)
S_TKc 41..292 CDD:214567 97/253 (38%)
UBA_SIK 335..380 CDD:270523 11/44 (25%)
Smok3cNP_001297632.1 STKc_AMPK-like 27..275 CDD:270905 97/252 (38%)
UBA_MARK_Par1 295..334 CDD:270522 11/48 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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