DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sik3 and mark2a

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:XP_009293774.1 Gene:mark2a / 562231 ZFINID:ZDB-GENE-030131-4145 Length:782 Species:Danio rerio


Alignment Length:752 Identity:254/752 - (33%)
Similarity:362/752 - (48%) Gaps:157/752 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SVDKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFREIAILKSL 95
            :.|:...:|.|.|.|||||||||.||||.:|:|..:||:||||||.||...|.|.|||:.|:|.|
Zfish    34 TADEQPHIGCYRLLKTIGKGNFAKVKLAKHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKLL 98

  Fly    96 RHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVV 160
            .||:|.:|:||:|::..:|||.|||..||:||:|||:|||||.||...|.|:||||.|||::.:|
Zfish    99 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIV 163

  Fly   161 HRDLKAENVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLG 225
            ||||||||:|||.|||||:|||||||.:..|..|.|:||||||||||:|||.:||||:.|:||||
Zfish   164 HRDLKAENLLLDADMNIKIADFGFSNEFTLGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 228

  Fly   226 VVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTI-KQIIKH 289
            |:||.||.|:|||||:.:.||:.||:.||:||||:||.:||.|::..||:.|.:|.:: :||:|.
Zfish   229 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPTKRGSLEQQIMKD 293

  Fly   290 RWLS------------EWQSEMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHM 342
            ||::            |.|.:.::.:|.|.....:|           |...|        :|..|
Zfish   294 RWMNVGHEDEELKPYIEPQPDYKDPKRTGQHPSSAG-----------GWKRD--------IMIRM 339

  Fly   343 LQLPGLTADMIAQSVHEQRFDNIYAIYNLLH------DKLQQRRRENQRLQHHASLAYSRSRKTS 401
                |.:.|.|..|:..|:::::.|.|.||.      |:|..:.|....:.::|.   |.|.|..
Zfish   340 ----GYSLDEIQDSLINQKYNDVMATYLLLDYRNSELDELSIKARPGTDITNNAQ---SPSHKGQ 397

  Fly   402 ITTGVVDRSEPVKQESLDRLSPLSNANASSSALGFGWSDVAVDLEKY--GDFELECLARSNDPPV 464
            .:|..:.......|.|:....|    ...|..:|...|...|.....  ||.:     ::..|..
Zfish   398 RSTSNLKSRRSTDQSSVSSKRP----QGDSKHIGSSGSSSKVPPSPLISGDHK-----KTPTPST 453

  Fly   465 NAQHLSAHAGGGVNGANTRRHTVG----------PGDVA----------------HEQAL---AN 500
            |: .||:..|...|...|.|.|:|          ||..|                |.::|   |:
Zfish   454 NS-ILSSGTGRSRNSPITERATLGVQNGKDSLHTPGSRASTASAAAVLAASSRTRHHKSLSTSAH 517

  Fly   501 PNVPPIDFKCPPQCSDPTQPVPYYPVNLPMLQNQPLHNLTIKDQHLLKPPVVMGASSFGRRASDG 565
            |:.|.:....|...:...      ||..|..||..:.::..:             ::|.|..: .
Zfish   518 PSPPDLHAHRPSTANQRA------PVVSPSAQNINISSMADR-------------TNFSRGVT-S 562

  Fly   566 GANLHIYYPATGTVVGPAQGQQMDT----AGYYINPNCGTDPLAVQELSPLNEQ---------SV 617
            .:..|             .|||..|    |..|      .||.|...||..|.|         |.
Zfish   563 RSTFH-------------AGQQRATRDQQASAY------NDPSASPSLSHGNSQVRRPGTGIFSK 608

  Fly   618 AQMQCCQENAT----------GECNEE-----LQSYMQKRGGTQRHTVGCTED--LSVAHGSGAG 665
            ...:..:.|.:          ||..:|     |.:..:...|||.|.....:|  .|.:..|...
Zfish   609 FTSKFVRRNLSFRFPRRSPYEGEGRDEASRPMLSTADKMEKGTQGHPSDENKDSFSSSSPASSTP 673

  Fly   666 SQSQAPTTSSNMRQRRTGLLTVTERPPVIPPEIIREV 702
            |.:||...:.....|.|..:..|.  .:.|.|:::|:
Zfish   674 SSTQASKDTKPRSLRFTWSMKTTS--SMEPNEMMKEI 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 154/252 (61%)
S_TKc 41..292 CDD:214567 154/251 (61%)
UBA_SIK 335..380 CDD:270523 13/50 (26%)
mark2aXP_009293774.1 STKc_MARK 44..296 CDD:270974 154/251 (61%)
S_TKc 44..296 CDD:214567 154/251 (61%)
UBA_MARK2 314..367 CDD:270589 16/75 (21%)
MARK2_C 683..781 CDD:213386 6/28 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5061
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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