DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and mark3a

DIOPT Version :10

Sequence 1:NP_611361.4 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:XP_021336197.1 Gene:mark3a / 334300 ZFINID:ZDB-GENE-030131-6232 Length:746 Species:Danio rerio


Alignment Length:723 Identity:235/723 - (32%)
Similarity:352/723 - (48%) Gaps:158/723 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFREIAILKSLRHPHITR 102
            :|.|.|.|||||||||.||||.:|:|.::||||:||||.||...|.|..||:.|:|:|.||:|.:
Zfish    54 IGNYRLLKTIGKGNFAKVKLARHILTGSEVAIKMIDKTQLNPTSLQKLSREVTIMKNLNHPNIVK 118

  Fly   103 LYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHYCHRRGVVHRDLKAE 167
            |:||:|::..::||.|||..||:||:|||:|||||.||...|.|:||||.|||::.:||||||||
Zfish   119 LFEVIETEKTLFLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAE 183

  Fly   168 NVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPKSDIWSLGVVLYALV 232
            |:|||.|||||:|||||||.:..|:.|.|:||||||||||:|||.:||||:.|:|||||:||.||
Zfish   184 NLLLDGDMNIKIADFGFSNEFMVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 248

  Fly   233 CGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTIKQIIKHRWLSEWQS 297
            .|:|||||:.:.||:.||:.||:||||:||.:||.|::..||:.|.:|.|::||:|.||::   |
Zfish   249 SGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPAKRGTLEQIMKERWIN---S 310

  Fly   298 EMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGLTADMIAQSVHEQRF 362
            ..::.|    :.|         .|......||. .::|.:|..      |.:.:.|.:|:.:..:
Zfish   311 GFEDDE----LKP---------FTEPDADISDQ-KRIDVIVGM------GFSKEKIHESLFKMNY 355

  Fly   363 DNIYAIYNLLHDKLQQRRRENQRLQHHASLAYSRSRKTSITTGVVDRSEPVKQESLDRLSPLSNA 427
            |.:.|||.||..|..:...::   ..:::|:.:::|                        |.|..
Zfish   356 DEVTAIYLLLGRKTHEEVSDS---SSNSNLSVAKTR------------------------PSSEM 393

  Fly   428 NASSSALGFGWSDVAVDLEKYGDFELECLARSNDPPVNAQHLSAHAG-GGVNGANTRRHTVGPGD 491
            |:.|.:                                  ||..... .......:|||:...|.
Zfish   394 NSQSPS----------------------------------HLKVQRSISSSESRKSRRHSEQVGV 424

  Fly   492 VAHEQALANPNVPPI--DFKCPPQCSDPTQPVPYYPVNLPMLQNQPLHNLT-IKDQ---HLLKPP 550
            ||:.....:..|.|:  |.:...:.....:.:|.:....|:|.|....|.| |.|:   :.:...
Zfish   425 VANNALSNSKRVVPVTADSEVKQEGGVIARKLPNHSPPSPLLGNANNPNKTEIPDRKKGNSITSN 489

  Fly   551 VVMGASSFGRR------------------------------ASDGGANLHIYYPATGTVVGPAQ- 584
            .:.|:.|..||                              :.|.||:.|    :..|.|.|.: 
Zfish   490 NISGSGSMSRRNTYVCTERNNTDRLSVIPNGKENSVSLSPSSRDPGASTH----SISTSVTPDKT 550

  Fly   585 -------------GQQMD--TAGYYINPNCGTDPLAVQELSPLNEQSVAQMQCCQENATGECNEE 634
                         ||..|  ||.|...|.....|.:....:.|..:..:::  .:.|.:...::.
Zfish   551 RFPRGSASRSTFHGQVRDRRTATYNGPPASPAQPRSRANANNLLTKLTSKL--TRRNMSFRFSKR 613

  Fly   635 LQSYMQKRG---GTQRHTVGCTEDLSVAHGSGAGSQSQAPTTSSNMRQRRTGLLTVTERPPVIPP 696
            :.:..::.|   |:.||..|..:......|.....:|...|.|.|        .|.|    :.|.
Zfish   614 VSTEFERSGRFEGSSRHVSGDQQKDEGKDGKDGKPRSLRFTWSMN--------TTST----MEPA 666

  Fly   697 EIIREVES 704
            :||.|:.:
Zfish   667 DIINEIRT 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_611361.4 Protein Kinases, catalytic domain 40..292 CDD:473864 153/251 (61%)
UBA_SIK 335..380 CDD:270523 12/44 (27%)
mark3aXP_021336197.1 STKc_MARK 56..308 CDD:270974 153/251 (61%)
UBA_like_SF 326..368 CDD:473871 13/48 (27%)
MARK1-3_C 647..744 CDD:213381 10/40 (25%)

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