DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sik3 and RGD1560303

DIOPT Version :9

Sequence 1:NP_001188969.1 Gene:Sik3 / 37152 FlyBaseID:FBgn0262103 Length:1471 Species:Drosophila melanogaster
Sequence 2:XP_218667.4 Gene:RGD1560303 / 292948 RGDID:1560303 Length:494 Species:Rattus norvegicus


Alignment Length:617 Identity:160/617 - (25%)
Similarity:249/617 - (40%) Gaps:181/617 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PSTSKISV-DKLLRVGYYELEKTIGKGNFAVVKLATNIVTKTKVAIKIIDKTCLNEEYLNKTFRE 88
            |||..:.: .:.:....|.:.|.:|:|....|:|:::.:|.|.||:|.:.|   :|.:...|..|
  Rat    12 PSTRSLGLFSEEVFTRQYTILKPLGQGGTTEVRLSSHRLTGTPVAVKALVK---HERHWASTMSE 73

  Fly    89 IAILKSLRHPHITRLYEVMESQSMIYLVTEYAPNGEIFDHLVANGRMKEPEAARVFTQLVSAVHY 153
            :.|:|.|.|.:|..|.:|||::..||::.|.|....:.:.:...||:||.||..:|.||:||:.|
  Rat    74 VEIMKILNHNNIVSLLQVMETEQNIYIIMEVAQGDSLLNRVQKAGRLKEDEARGIFVQLLSALGY 138

  Fly   154 CHRRGVVHRDLKAENVLLDKDMNIKLADFGFSNHYEEGATLKTWCGSPPYAAPEVFQGLEYDGPK 218
            ||.:|::|||||.:|:::|:..|:|:.|||....:..|..||..||:..:..||:|.||.|||||
  Rat   139 CHGKGIIHRDLKPDNIIVDEHGNVKIIDFGLGAKFLPGQKLKRLCGAFQFIPPELFLGLPYDGPK 203

  Fly   219 SDIWSLGVVLYALVCGALPFDGKTILELKSRVVLGKFRIPFFMSQECEQLIRNMLVVEPDRRYTI 283
            .|||:|||:||.:|.|..||.|.|:.||...|:.|::.||:.:|::...:|..:|.|...:|.|.
  Rat   204 VDIWALGVLLYFMVTGFAPFSGTTLSELSKNVLQGRYDIPYNLSKDLRSMISLLLTVNARQRPTA 268

  Fly   284 KQIIKHRWLSEWQSEMQEQERFGDMSPGSGTVSKSASTSSLGSASDSPPQLDSVVMTHMLQLPGL 348
            :.:..|.||.||...:              |...:..||.        |..|.:|....:   |.
  Rat   269 QDLSSHPWLQEWGKTL--------------TFHSNRDTSF--------PNRDIMVAMENI---GF 308

  Fly   349 TADMIAQSVHEQRFDNIYAIYNLLHDKLQQRRRENQRLQHHASLAYSRSRKTSITTGVVDRSEPV 413
            ....|.:|:..::||...|.|.||            |:|                          
  Rat   309 HVQDIKESLKHKKFDETMATYLLL------------RVQ-------------------------- 335

  Fly   414 KQESLDRLSPLSNANASSSALGFGWSDVAVDLEKYGDFELECLARSNDPPVNAQHLSAHAGGGVN 478
                                                                     |...|| |
  Rat   336 ---------------------------------------------------------ACQNGG-N 342

  Fly   479 GANTRRHTVGPGDVAHEQALANPNVPPIDFKCPPQCSDP-TQPVPYYP---VNLPMLQNQPLHNL 539
            ...|:              |.||.|.|.     |..:|| |.|:|  |   .:.|.|:       
  Rat   343 YVQTK--------------LLNPGVAPF-----PSAADPDTFPLP--PRRRASEPSLK------- 379

  Fly   540 TIKDQHLLKPPVVMGASSFGRRASDGGANLHIYYPATGTVVGPAQGQQMDTAGYYINPNCGTDPL 604
                       :|:.:|...|....||.|..:....|     |..|:     ||   ..|.|||.
  Rat   380 -----------IVVASSEQQRLRQSGGTNAPVQPKKT-----PVMGR-----GY---KRCVTDPC 420

  Fly   605 AVQELSPLNEQSVAQMQCCQENATGECNEELQ 636
            .::..:.:|..:::.....|..:..|.:..||
  Rat   421 ILRRNTGMNVDTISFSASSQTLSDSERSRSLQ 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sik3NP_001188969.1 PKc_like 40..292 CDD:304357 97/251 (39%)
S_TKc 41..292 CDD:214567 97/250 (39%)
UBA_SIK 335..380 CDD:270523 11/44 (25%)
RGD1560303XP_218667.4 STKc_AMPK-like 28..276 CDD:270905 97/250 (39%)
S_TKc 29..277 CDD:214567 97/250 (39%)
UBA_MARK_Par1 295..332 CDD:270522 10/39 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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